Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   MGAS15252_RS06370 Genome accession   NC_017040
Coordinates   1309139..1310173 (-) Length   344 a.a.
NCBI ID   WP_002994331.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS15252     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1304139..1315173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS15252_RS06335 (MGAS15252_1308) - 1304915..1305217 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  MGAS15252_RS06340 (MGAS15252_1309) rnpM 1305210..1305506 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  MGAS15252_RS06345 (MGAS15252_1310) nusA 1305522..1306679 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  MGAS15252_RS06350 (MGAS15252_1311) rimP 1306854..1307390 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  MGAS15252_RS06360 (MGAS15252_1313) trmB 1307649..1308284 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  MGAS15252_RS06365 (MGAS15252_1314) ccrZ 1308284..1309075 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  MGAS15252_RS06370 (MGAS15252_1315) pptB 1309139..1310173 (-) 1035 WP_002994331.1 ABC transporter permease Regulator
  MGAS15252_RS06375 (MGAS15252_1316) pptA 1310176..1310901 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  MGAS15252_RS06380 (MGAS15252_1317) - 1310973..1311392 (+) 420 WP_014407783.1 HIT family protein -
  MGAS15252_RS06385 (MGAS15252_1318) - 1311389..1311745 (+) 357 WP_014407784.1 hypothetical protein -
  MGAS15252_RS06390 (MGAS15252_1319) brpA 1311856..1313139 (-) 1284 WP_014407785.1 biofilm formation/cell division transcriptional regulator BrpA -
  MGAS15252_RS06395 (MGAS15252_1320) - 1313148..1313672 (-) 525 WP_014407786.1 GNAT family N-acetyltransferase -
  MGAS15252_RS06400 (MGAS15252_1321) tsaE 1313647..1314108 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40242.46 Da        Isoelectric Point: 10.3713

>NTDB_id=35073 MGAS15252_RS06370 WP_002994331.1 1309139..1310173(-) (pptB) [Streptococcus pyogenes MGAS15252]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=35073 MGAS15252_RS06370 WP_002994331.1 1309139..1310173(-) (pptB) [Streptococcus pyogenes MGAS15252]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAGCAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAACGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTATCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427

Multiple sequence alignment