Detailed information NTG0350668

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: CKAES1M_RS18690
• Genome accession: NZ_CP037925
• Coordinates: 3890615..3892837 (-)
• Length: 740 a.a.
• NCBI ID: WP_133279808.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain AES1M
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3885615..3897837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKAES1M_RS18655 (CKAES1M_03649)	murB	3886005..3887024 (-)	1020	WP_003124431.1	UDP-N-acetylmuramate dehydrogenase	-
CKAES1M_RS18660 (CKAES1M_03650)	-	3887021..3887485 (-)	465	WP_003091154.1	low molecular weight protein-tyrosine-phosphatase	-
CKAES1M_RS18665 (CKAES1M_03651)	kdsB	3887485..3888249 (-)	765	WP_003091155.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CKAES1M_RS18670 (CKAES1M_03652)	-	3888249..3888434 (-)	186	WP_003091157.1	Trm112 family protein	-
CKAES1M_RS18675 (CKAES1M_03653)	lpxK	3888472..3889470 (-)	999	WP_003091159.1	tetraacyldisaccharide 4'-kinase	-
CKAES1M_RS18680 (CKAES1M_03654)	-	3889470..3889910 (-)	441	WP_003091161.1	biopolymer transporter ExbD	-
CKAES1M_RS18685 (CKAES1M_03655)	exbB	3889907..3890542 (-)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
CKAES1M_RS18690 (CKAES1M_03656)	comA	3890615..3892837 (-)	2223	WP_133279808.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CKAES1M_RS18695 (CKAES1M_03657)	-	3892968..3893501 (+)	534	WP_003091165.1	DUF2062 domain-containing protein	-
CKAES1M_RS18700 (CKAES1M_03658)	-	3893589..3894833 (-)	1245	WP_003113987.1	lipoprotein-releasing ABC transporter permease subunit	-
CKAES1M_RS18705 (CKAES1M_03659)	lolD	3894903..3895586 (-)	684	WP_003118086.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
CKAES1M_RS18710 (CKAES1M_03660)	-	3895579..3896829 (-)	1251	WP_003091170.1	lipoprotein-releasing ABC transporter permease subunit	-
CKAES1M_RS18715 (CKAES1M_03661)	-	3896932..3897531 (+)	600	WP_038817517.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 79758.42 Da
• Isoelectric Point: 10.5155

>NTDB_id=350668 CKAES1M_RS18690 WP_133279808.1 3890615..3892837(-) (comA) [Pseudomonas aeruginosa strain AES1M]
MRLGLPALAAGLLALRFLAELPSVGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGVTRFRLEEVRAARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLAQRVGAV
GTVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLATLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWRPGAGAVGMALGLAMPLLALGLPLSLSGAPANLLAVPWIELLVVPP
ALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLLP
ALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTREHVLLYDSGARQGAFDMGERVVVPVLRSLDLRRLDGLLLSHADNDHAG
GAPTVASRFPPVWLVSGEPARLPSPLFADSCDERSWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGEVLLLTGDISRAA
EHAWLARQADPRVDWLLAPHHGSRSSSGVVFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTFL
LGSRGGARRERDSAHFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=350668 CKAES1M_RS18690 WP_133279808.1 3890615..3892837(-) (comA) [Pseudomonas aeruginosa strain AES1M]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGGTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCGTCACGCGCTTCCGGCTGGAGGAGGTCCGCGCTGCGCGGGGCGTGCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGCGGCGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCCCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAGGCCTGGTTGTTGGCGCAGCGGGTCGGTGCTGTG
GGCACGGTGAAGGCGGGCCAGCGCCTGCAGCCGGCCAGCGGCCTGGATGCCTGGCGCGATGCCTGGCGCCAGCGCCTGCT
GGCGGTCGACGCACAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCGGGGTTGAGCGCGGCCGAGT
GGCGAATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGTTTCGAGGTCCCGGTGCGGCGCGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGCCACCTGGGCTTGCTGACCCCGCTGCTGGCAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGCGGCCTGGGGCGGGCGCAGTGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGGCGC
TGGGCCTGCCGTTGAGCCTGAGCGGAGCGCCGGCCAACCTGCTGGCGGTGCCTTGGATCGAACTGCTGGTAGTGCCCCCG
GCCCTGGCGGGGAGCCTGCTGCTGTGGGTGCCCGGGCTGGGCGAGGGGCTGCTTCGCGCCGCTGGCGTTTCGCTGGACCT
GCTGTTTCGTGCGCTTGGCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAGCGC
TGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGCGTTGCTACTGCCG
GCATTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGCCAGGGGCTGGCCGT
GCTGGTGCGTACCCGAGAGCATGTCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCGTTCGACATGGGCGAGCGGGTGG
TGGTGCCGGTGCTGCGCAGCCTGGACCTGCGGCGCCTGGACGGCCTGTTGCTGAGCCATGCCGACAACGACCATGCAGGC
GGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGTTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTTGTT
CGCGGACAGCTGCGACGAGCGGAGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCACAGGCCGGCGACA
GCAACGACCGCTCCTGTGTGCTGAGGGTCGAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATCTCGCGTGCGGCC
GAGCATGCCTGGCTGGCGCGACAGGCCGATCCCCGGGTCGACTGGTTGCTGGCGCCGCATCATGGCAGCCGCAGTTCCTC
CGGAGTCGTCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATCCCC
ATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTTCTC
CTCGGAAGCCGTGGCGGCGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-463)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-655)

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.669	97.432	0.572
comA	Ralstonia pseudosolanacearum GMI1000	35.658	100	0.366