Detailed information NTG0350586

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: GLO74_RS00085
• Genome accession: NZ_CP046354
• Coordinates: 13350..14447 (-)
• Length: 365 a.a.
• NCBI ID: WP_000266669.1
• Uniprot ID: C1CBK4
• Organism: Streptococcus pneumoniae strain 310
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 8350..19447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GLO74_RS00070 (GLO74_00070)	-	8816..10438 (-)	1623	WP_000958769.1	ABC-F family ATP-binding cassette domain-containing protein	-
GLO74_RS00075 (GLO74_00075)	trpS	10644..11669 (+)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
GLO74_RS00080 (GLO74_00080)	guaB	11821..13299 (+)	1479	WP_000073428.1	IMP dehydrogenase	-
GLO74_RS00085 (GLO74_00085)	recF	13350..14447 (-)	1098	WP_000266669.1	DNA replication/repair protein RecF	Machinery gene
GLO74_RS00090 (GLO74_00090)	yaaA	14450..14818 (-)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
GLO74_RS00095 (GLO74_00095)	yfmF	14977..16227 (+)	1251	WP_000424267.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
GLO74_RS00100 (GLO74_00100)	yfmH	16224..17507 (+)	1284	WP_000170215.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
GLO74_RS00105 (GLO74_00105)	rodZ	17549..18370 (+)	822	WP_001227957.1	cytoskeleton protein RodZ	-
GLO74_RS00110 (GLO74_00110)	pgsA	18381..18926 (+)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41960.00 Da
• Isoelectric Point: 8.6746

>NTDB_id=350586 GLO74_RS00085 WP_000266669.1 13350..14447(-) (recF) [Streptococcus pneumoniae strain 310]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKASVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=350586 GLO74_RS00085 WP_000266669.1 13350..14447(-) (recF) [Streptococcus pneumoniae strain 310]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTTCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: C1CBK4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46