Detailed information NTG0350574

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FOB92_RS08850
• Genome accession: NZ_CP046335
• Coordinates: 1836701..1837798 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266646.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain FDAARGOS_684
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1831701..1842798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB92_RS08825 (FOB92_08825)	pgsA	1832216..1832761 (-)	546	WP_000712123.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FOB92_RS08830 (FOB92_08830)	rodZ	1832772..1833599 (-)	828	WP_001227984.1	cytoskeleton protein RodZ	-
FOB92_RS08835 (FOB92_08835)	yfmH	1833641..1834924 (-)	1284	WP_000170225.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
FOB92_RS08840 (FOB92_08840)	yfmF	1834921..1836171 (-)	1251	WP_000424291.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
FOB92_RS08845 (FOB92_08845)	yaaA	1836330..1836698 (+)	369	WP_000455896.1	S4 domain-containing protein YaaA	-
FOB92_RS08850 (FOB92_08850)	recF	1836701..1837798 (+)	1098	WP_000266646.1	DNA replication/repair protein RecF	Machinery gene
FOB92_RS08855 (FOB92_08855)	guaB	1837850..1839328 (-)	1479	WP_000073419.1	IMP dehydrogenase	-
FOB92_RS08860 (FOB92_08860)	trpS	1839480..1840505 (-)	1026	WP_000165449.1	tryptophan--tRNA ligase	-
FOB92_RS08865 (FOB92_08865)	-	1840711..1842333 (+)	1623	WP_000958774.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42036.13 Da
• Isoelectric Point: 8.1471

>NTDB_id=350574 FOB92_RS08850 WP_000266646.1 1836701..1837798(+) (recF) [Streptococcus mitis strain FDAARGOS_684]
MWLQHLSLKTFRNYKETKIDFNPKLNIFLGRNAQGKTNILEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSVRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLEHFGRKKHFELSNQIEELSISYQSSVKSTEKEDLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKVAVNEN

Nucleotide

• Length: 1098 bp

>NTDB_id=350574 FOB92_RS08850 WP_000266646.1 1836701..1837798(+) (recF) [Streptococcus mitis strain FDAARGOS_684]
ATGTGGCTACAACACCTATCTCTCAAAACTTTTCGTAACTACAAAGAGACGAAAATAGACTTTAATCCTAAATTAAATAT
CTTTTTAGGACGCAATGCTCAAGGAAAAACAAATATACTAGAGGCTATCTATTTTTTAGCCTTAACTCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTAGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATAGAACTAACACAAAAAGGCCGTGTGACAAAAGTTAATCATTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCAGTTCGACGAAAAT
TTATTGATATGGAGCTTGGGCAAATTAAGCCAATCTATTTATCAGATTTAACCAATTATAACCATATTCTTAAGCAAAGA
AATACCTATTTAAAATCAGCTCAAAAAATAGATGAAACCTTCCTTTCAGTACTAGATGATCAGCTAGTCGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTTATAAAAAAACTAGAGCATTTTGGTCGTAAGAAACATTTTGAACTTTCTAATC
AGATTGAAGAGTTGTCAATATCCTATCAATCTTCTGTAAAGTCAACTGAAAAAGAAGACTTATCAGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGGTCCAGAGATTTATTTAAAAAGAATACTGGTGTTGGGCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGTCAAGGCCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGTATTACTACAGAATCTCCGATATTATTACTTGACGATGTCATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAGTCAATCCAAACCTTTATAACAACAACAAGCTTAGATCATCTTCAAAATTTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGTTGCTGTAAATGAAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	96.712	100	0.967
recF	Bacillus subtilis subsp. subtilis str. 168	45.528	100	0.46