Detailed information NTG0350075

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GJV39_RS03290
• Genome accession: NZ_CP046114
• Coordinates: 637999..638982 (+)
• Length: 327 a.a.
• NCBI ID: WP_021110211.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain SCW0912
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 632999..643982

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJV39_RS03275 (GJV39_03275)	-	634373..635968 (+)	1596	WP_005712944.1	ABC transporter substrate-binding protein	-
GJV39_RS03280 (GJV39_03280)	-	636062..637066 (+)	1005	WP_005712947.1	ABC transporter permease subunit	-
GJV39_RS03285 (GJV39_03285)	-	637095..637988 (+)	894	WP_005712949.1	ABC transporter permease subunit	-
GJV39_RS03290 (GJV39_03290)	amiE	637999..638982 (+)	984	WP_021110211.1	dipeptide ABC transporter ATP-binding protein	Regulator
GJV39_RS03295 (GJV39_03295)	amiE	638997..639977 (+)	981	WP_010786347.1	peptide ABC transporter ATP-binding protein	Regulator
GJV39_RS03300 (GJV39_03300)	ruvC	640029..640607 (-)	579	WP_005712956.1	crossover junction endodeoxyribonuclease RuvC	-
GJV39_RS03305 (GJV39_03305)	-	640681..641136 (-)	456	WP_021110210.1	hypothetical protein	-
GJV39_RS03310 (GJV39_03310)	-	641254..641994 (-)	741	WP_010786350.1	YebC/PmpR family DNA-binding transcriptional regulator	-
GJV39_RS03315 (GJV39_03315)	nudB	642133..642582 (-)	450	WP_021110209.1	dihydroneopterin triphosphate diphosphatase	-
GJV39_RS03320 (GJV39_03320)	-	642945..643622 (+)	678	WP_005712963.1	TolC family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35893.75 Da
• Isoelectric Point: 7.1835

>NTDB_id=350075 GJV39_RS03290 WP_021110211.1 637999..638982(+) (amiE) [Glaesserella parasuis strain SCW0912]
MALLKVDELSVHFGDKKAPFRAVDRVSYEVNEGEVLGIVGESGSGKSVSSLAIMGLIDFPGRVMANSLRFNGHNLLDLKP
KEKQKIVGADVAMIFQDAMTSLNPSYTVGYQIMEALKVHQGGSKAWRKERAIELLTMVGIPDPTSRLDVYPHQLSGGMSQ
RVMIAMAIACNPKLLIADEPTTALDVTIQAQIIDLLLELQRKENMALILITHDLALVAESAHRIIVMYAGQVVEEGKSEQ
IFKSPLHPYTQALLKALPEFAEGKSRLQSLPGVVPGKYDHPQGCLLNPRCPYATDLCRQKEPELRTVNGRQVKCHTPLNE
SGLPQPI

Nucleotide

• Length: 984 bp

>NTDB_id=350075 GJV39_RS03290 WP_021110211.1 637999..638982(+) (amiE) [Glaesserella parasuis strain SCW0912]
ATGGCATTATTAAAAGTAGATGAACTTTCGGTTCACTTTGGCGATAAAAAAGCCCCGTTTAGAGCGGTGGATCGAGTAAG
TTATGAAGTCAATGAAGGCGAAGTGCTAGGCATTGTGGGCGAGTCAGGTTCGGGTAAATCGGTCAGTTCCCTTGCAATTA
TGGGGCTTATTGATTTCCCTGGGCGTGTAATGGCAAATTCGTTACGTTTCAACGGACATAATCTGCTTGATTTAAAACCA
AAAGAGAAGCAGAAAATTGTCGGCGCTGATGTAGCGATGATTTTCCAAGATGCAATGACAAGCCTCAACCCAAGTTACAC
TGTGGGTTATCAAATTATGGAAGCCCTGAAGGTTCATCAAGGCGGTTCAAAAGCGTGGCGAAAAGAGCGTGCAATTGAAT
TATTGACGATGGTTGGCATTCCTGATCCAACATCTCGTTTAGATGTCTATCCGCACCAACTTTCAGGCGGTATGAGCCAA
CGTGTGATGATCGCCATGGCGATTGCTTGCAATCCGAAATTATTGATTGCTGACGAGCCGACAACGGCGTTAGATGTAAC
CATTCAAGCACAAATTATTGATTTATTGCTTGAGTTGCAACGCAAAGAAAATATGGCATTGATTTTGATTACTCACGATT
TAGCCTTAGTCGCCGAGTCGGCTCACCGTATTATCGTGATGTATGCAGGGCAAGTGGTGGAAGAAGGCAAATCTGAACAG
ATTTTCAAATCACCGCTTCACCCTTATACCCAAGCGTTATTAAAAGCGTTGCCTGAGTTTGCCGAAGGTAAATCTCGCTT
GCAATCACTACCGGGTGTCGTACCGGGTAAATATGACCATCCGCAAGGTTGCTTGCTCAACCCACGCTGTCCGTATGCAA
CGGATTTATGCCGACAAAAAGAGCCGGAACTACGCACAGTAAATGGCAGACAGGTGAAATGCCATACGCCGTTGAATGAA
AGTGGATTGCCACAACCAATTTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	44.586	96.024	0.428
amiE	Streptococcus thermophilus LMG 18311	43.949	96.024	0.422
amiE	Streptococcus thermophilus LMD-9	43.949	96.024	0.422
oppD	Streptococcus mutans UA159	44.444	93.578	0.416