Detailed information NTG0350076

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GJV39_RS03295
• Genome accession: NZ_CP046114
• Coordinates: 638997..639977 (+)
• Length: 326 a.a.
• NCBI ID: WP_010786347.1
• Uniprot ID: B8F5G5
• Organism: Glaesserella parasuis strain SCW0912
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 633997..644977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJV39_RS03275 (GJV39_03275)	-	634373..635968 (+)	1596	WP_005712944.1	ABC transporter substrate-binding protein	-
GJV39_RS03280 (GJV39_03280)	-	636062..637066 (+)	1005	WP_005712947.1	ABC transporter permease subunit	-
GJV39_RS03285 (GJV39_03285)	-	637095..637988 (+)	894	WP_005712949.1	ABC transporter permease subunit	-
GJV39_RS03290 (GJV39_03290)	amiE	637999..638982 (+)	984	WP_021110211.1	dipeptide ABC transporter ATP-binding protein	Regulator
GJV39_RS03295 (GJV39_03295)	amiE	638997..639977 (+)	981	WP_010786347.1	peptide ABC transporter ATP-binding protein	Regulator
GJV39_RS03300 (GJV39_03300)	ruvC	640029..640607 (-)	579	WP_005712956.1	crossover junction endodeoxyribonuclease RuvC	-
GJV39_RS03305 (GJV39_03305)	-	640681..641136 (-)	456	WP_021110210.1	hypothetical protein	-
GJV39_RS03310 (GJV39_03310)	-	641254..641994 (-)	741	WP_010786350.1	YebC/PmpR family DNA-binding transcriptional regulator	-
GJV39_RS03315 (GJV39_03315)	nudB	642133..642582 (-)	450	WP_021110209.1	dihydroneopterin triphosphate diphosphatase	-
GJV39_RS03320 (GJV39_03320)	-	642945..643622 (+)	678	WP_005712963.1	TolC family protein	-
GJV39_RS03325 (GJV39_03325)	folP	643786..644631 (+)	846	WP_021110208.1	dihydropteroate synthase	-

Sequence

Protein

• Length: 326 a.a.
• Molecular weight: 36674.69 Da
• Isoelectric Point: 8.9387

>NTDB_id=350076 GJV39_RS03295 WP_010786347.1 638997..639977(+) (amiE) [Glaesserella parasuis strain SCW0912]
MQNNTQNPPLLNAADLKKYYPVKKGMFSKPKLVKAVDGVSFTLERGKTLAVVGESGCGKSTLGRMLTMIEPPTEGELFYN
GQNFLVSDKETEKLRRKKIQIVFQNPYASLNPRKKVGAILEEPLLINTELSAQERKAQVLEMMAKVGLKPEFCDRYPHMF
SGGQRQRIAIARGLMLKPDIVVADEPVSALDVSVRAQVLNLMMDLQEELGLSYVFISHDLSVVEHIADEVMVMYLGRCVE
QGNTKEIFGNPRHPYTQALLSATPRLEAEHRRERIKLTGELPSPLNPPKGCAFHARCRLATERCKQERPELKTYENGTKI
ACFMVE

Nucleotide

• Length: 981 bp

>NTDB_id=350076 GJV39_RS03295 WP_010786347.1 638997..639977(+) (amiE) [Glaesserella parasuis strain SCW0912]
ATGCAAAACAATACCCAAAACCCACCGCTTCTCAATGCGGCGGATCTCAAAAAATACTACCCTGTAAAAAAAGGAATGTT
TAGCAAGCCGAAACTAGTAAAAGCGGTGGACGGCGTTTCTTTTACCCTTGAACGTGGCAAAACCCTTGCTGTGGTGGGCG
AATCGGGCTGTGGTAAATCAACCTTAGGGCGTATGCTGACAATGATCGAGCCACCAACAGAAGGGGAATTGTTCTACAAC
GGACAAAATTTCTTAGTCAGCGATAAGGAAACAGAAAAATTACGTCGTAAGAAAATCCAGATCGTTTTCCAAAACCCTTA
TGCGTCGCTTAATCCACGTAAAAAAGTCGGGGCAATTTTAGAAGAACCCCTGCTTATTAATACCGAATTGTCTGCACAAG
AGCGTAAGGCACAAGTGTTAGAAATGATGGCAAAAGTGGGGCTAAAACCTGAGTTTTGCGACCGCTATCCGCATATGTTC
TCAGGCGGACAACGCCAACGTATTGCAATAGCCCGAGGTTTAATGCTGAAACCTGATATTGTGGTGGCAGATGAACCTGT
GTCAGCCCTTGACGTATCCGTTCGTGCACAGGTATTAAACTTGATGATGGATTTACAAGAAGAGCTTGGGTTGTCTTATG
TGTTTATCTCTCACGATTTATCGGTGGTAGAACATATTGCTGACGAAGTGATGGTAATGTATTTAGGACGTTGTGTAGAA
CAAGGCAACACCAAAGAGATCTTCGGTAACCCACGCCACCCTTACACCCAAGCCTTGCTATCAGCCACACCACGTTTGGA
AGCGGAGCATCGCCGAGAGCGGATTAAACTCACCGGCGAATTACCAAGTCCGCTTAATCCACCGAAAGGCTGTGCTTTCC
ACGCCCGTTGCCGTTTGGCGACAGAGCGTTGTAAGCAAGAACGTCCAGAGCTAAAAACCTATGAAAACGGCACGAAGATA
GCTTGTTTTATGGTGGAGTAA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-304)

• ABC transporter (ABC_tran) (37-187)

3D structure

• AlphaFold DB: B8F5G5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	39.61	94.479	0.374
amiF	Streptococcus thermophilus LMD-9	51.709	71.779	0.371
amiF	Streptococcus thermophilus LMG 18311	51.709	71.779	0.371
amiF	Streptococcus salivarius strain HSISS4	50.855	71.779	0.365
amiE	Streptococcus thermophilus LMG 18311	38.636	94.479	0.365
amiE	Streptococcus thermophilus LMD-9	38.636	94.479	0.365