Detailed information NTG0349879

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: A0073_RS04300
• Genome accession: NZ_CP037747
• Coordinates: 788579..789523 (+)
• Length: 314 a.a.
• NCBI ID: WP_131936869.1
• Uniprot ID: -
• Organism: Campylobacter helveticus strain 2013D-9613
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 783579..794523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0073_RS10905	-	783618..783707 (-)	90	Protein_862	hypothetical protein	-
A0073_RS04265 (A0073_04265)	-	783670..784347 (-)	678	WP_131936859.1	acetyltransferase	-
A0073_RS04270 (A0073_04270)	-	784350..784748 (-)	399	WP_131936861.1	FdtA/QdtA family cupin domain-containing protein	-
A0073_RS04275 (A0073_04275)	-	784783..785181 (-)	399	WP_131936863.1	FdtA/QdtA family cupin domain-containing protein	-
A0073_RS10480	-	785184..785540 (-)	357	WP_252972859.1	acyltransferase	-
A0073_RS10485	-	785537..785770 (-)	234	WP_252972860.1	hypothetical protein	-
A0073_RS04285 (A0073_04285)	rfbB	785767..786789 (-)	1023	WP_131936865.1	dTDP-glucose 4,6-dehydratase	-
A0073_RS04290 (A0073_04290)	rfbA	786786..787672 (-)	887	Protein_869	glucose-1-phosphate thymidylyltransferase RfbA	-
A0073_RS04295 (A0073_04295)	-	787669..788529 (-)	861	WP_131936867.1	glycosyltransferase family 2 protein	-
A0073_RS04300 (A0073_04300)	waaF	788579..789523 (+)	945	WP_131936869.1	lipopolysaccharide heptosyltransferase II	Regulator
A0073_RS04305 (A0073_04305)	-	789513..790046 (-)	534	WP_131936871.1	HyaD/HybD family hydrogenase maturation endopeptidase	-
A0073_RS04310 (A0073_04310)	cybH	790043..790735 (-)	693	WP_131936873.1	Ni/Fe-hydrogenase, b-type cytochrome subunit	-
A0073_RS04315 (A0073_04315)	-	790746..792461 (-)	1716	WP_082199397.1	nickel-dependent hydrogenase large subunit	-
A0073_RS04320 (A0073_04320)	-	792465..793604 (-)	1140	WP_082199396.1	hydrogenase small subunit	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 35639.45 Da
• Isoelectric Point: 10.5771

>NTDB_id=349879 A0073_RS04300 WP_131936869.1 788579..789523(+) (waaF) [Campylobacter helveticus strain 2013D-9613]
MKIFINLPTWLGDTVMASAAIYGIKEKFKEAEFIFFGSFVATGLFKEFPNSSIILEDKKKRYKQAFHLRQNHQFDLAFSF
RSALSAKLILKIIKSKKKFCFNKKILKDSHQVLKYLNFIEHTLNFQISSKDLKLPIKTKFKAPLQLKSGKKILALNPGAS
YGSAKRWDEEYFAKVGFEFAKSHEIIILGAGKEEAIICARIANILAQKGVRAKNLCNKTSIQTLAQNIALSDIFLTNDSG
AMHIGAALKVKMLVIFGPTKFTQTSPWQSENAKIIHLNLACMPCMKRTCILKHHKCMKDLSPKMVIEKLKEFKI

Nucleotide

• Length: 945 bp

>NTDB_id=349879 A0073_RS04300 WP_131936869.1 788579..789523(+) (waaF) [Campylobacter helveticus strain 2013D-9613]
ATGAAAATTTTTATCAATCTCCCCACTTGGCTAGGCGATACCGTAATGGCTAGTGCGGCGATTTATGGCATTAAGGAAAA
ATTTAAAGAAGCTGAATTTATCTTTTTTGGCTCTTTTGTAGCGACAGGGCTTTTTAAAGAATTTCCCAACTCAAGCATTA
TCTTAGAAGATAAAAAAAAGCGCTACAAACAAGCCTTTCATTTGCGTCAAAATCATCAATTTGACCTTGCATTTTCTTTT
CGCTCGGCACTTTCGGCAAAGCTTATTTTAAAAATCATAAAATCCAAAAAAAAATTTTGTTTCAACAAAAAAATCTTAAA
AGACTCACATCAAGTTTTAAAATACTTAAATTTCATTGAGCATACTTTAAATTTTCAAATCTCATCAAAAGATTTAAAAC
TACCCATCAAAACGAAATTTAAAGCACCCCTACAACTTAAAAGTGGCAAAAAAATTCTCGCTTTAAACCCTGGTGCAAGC
TATGGGAGTGCTAAACGCTGGGATGAAGAGTATTTTGCAAAAGTGGGATTTGAATTTGCCAAAAGCCACGAAATTATTAT
TCTTGGGGCGGGTAAAGAAGAGGCTATCATTTGTGCTAGAATTGCCAACATACTCGCACAAAAAGGCGTTAGGGCGAAAA
ATTTATGCAACAAAACAAGCATTCAAACCCTCGCACAAAATATCGCCTTAAGTGATATTTTCCTCACAAATGACAGCGGA
GCTATGCACATAGGTGCGGCTTTAAAGGTGAAAATGCTAGTGATTTTTGGACCGACTAAATTCACTCAAACCTCACCTTG
GCAGAGCGAAAATGCTAAAATTATCCATCTTAATTTAGCTTGTATGCCCTGTATGAAACGCACCTGCATACTAAAACACC
ATAAATGTATGAAAGATTTAAGTCCTAAAATGGTGATAGAAAAATTGAAAGAATTTAAGATTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (103-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.987	99.045	0.634