Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA1   Type   Machinery gene
Locus tag   NMO_RS09750 Genome accession   NC_013016
Coordinates   1903791..1904489 (-) Length   232 a.a.
NCBI ID   WP_015815914.1    Uniprot ID   C6S923
Organism   Neisseria meningitidis alpha14     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1898791..1909489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMO_RS09735 (NMO_1758) - 1899095..1900147 (-) 1053 WP_021438451.1 peptidylprolyl isomerase -
  NMO_RS09740 (NMO_1759) - 1900252..1902660 (-) 2409 WP_002254130.1 LPS-assembly protein LptD -
  NMO_RS09745 (NMO_1760) amgK 1902730..1903734 (+) 1005 WP_015815913.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  NMO_RS09750 (NMO_1761) dsbA1 1903791..1904489 (-) 699 WP_015815914.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMO_RS09755 - 1904516..1904707 (+) 192 WP_048816161.1 hypothetical protein -
  NMO_RS09760 (NMO_1762) murJ 1904707..1906245 (+) 1539 WP_015815915.1 murein biosynthesis integral membrane protein MurJ -
  NMO_RS09765 (NMO_1763) - 1906378..1907334 (+) 957 WP_015815916.1 YheT family hydrolase -
  NMO_RS09770 (NMO_1764) trpC 1907385..1908167 (+) 783 WP_015815917.1 indole-3-glycerol phosphate synthase TrpC -

Sequence


Protein


Download         Length: 232 a.a.        Molecular weight: 25263.86 Da        Isoelectric Point: 5.6310

>NTDB_id=34987 NMO_RS09750 WP_015815914.1 1903791..1904489(-) (dsbA1) [Neisseria meningitidis alpha14]
MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAH
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTA
FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 699 bp        

>NTDB_id=34987 NMO_RS09750 WP_015815914.1 1903791..1904489(-) (dsbA1) [Neisseria meningitidis alpha14]
ATGAAATCCAGACACCTCGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGGCTGGTCGAAGGGCAAAACTATACCGTCCTTG
CCAATCCGATTCCGCAACAGCAGGCAGGCAAAGTCGAAGTCCTTGAGTTTTTCGGCTATTTCTGTCCGCACTGCGCCCAC
CTCGAACCTGTTTTAAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTGGCAGAA
AGAAATGCTGACGCTGGCCCGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGAAAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAAATCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCCTACGAGTCCCCCGAAAGCCAGGCGCGCGCCGACAAAATGCAGGAGCTGACCGA
AACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGTAAATATAAAGTTGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCAGTAA

Domains


Predicted by InterproScan.

(63-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB C6S923

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

99.569

100

0.996

  dsbA2 Neisseria meningitidis MC58

76.19

81.466

0.621


Multiple sequence alignment