Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   NMO_RS09655 Genome accession   NC_013016
Coordinates   1880067..1880762 (-) Length   231 a.a.
NCBI ID   WP_015815903.1    Uniprot ID   C6S907
Organism   Neisseria meningitidis alpha14     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1875067..1885762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMO_RS09645 (NMO_1741) - 1877340..1878146 (-) 807 WP_015815901.1 inner membrane protein YpjD -
  NMO_RS09650 (NMO_1742) ffh 1878366..1879736 (+) 1371 WP_015815902.1 signal recognition particle protein -
  NMO_RS09655 (NMO_1743) dsbA2 1880067..1880762 (-) 696 WP_015815903.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMO_RS09660 (NMO_1744) - 1880877..1882988 (-) 2112 Protein_1811 TonB-dependent receptor -
  NMO_RS09665 (NMO_1745) - 1883266..1884273 (-) 1008 WP_048816127.1 IS5 family transposase -
  NMO_RS09670 (NMO_1746) - 1884407..1885012 (-) 606 WP_015815904.1 nitroreductase family protein -
  NMO_RS09675 (NMO_1747) - 1885061..1885459 (-) 399 WP_002216361.1 DoxX family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25461.98 Da        Isoelectric Point: 5.1502

>NTDB_id=34986 NMO_RS09655 WP_015815903.1 1880067..1880762(-) (dsbA2) [Neisseria meningitidis alpha14]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKLLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=34986 NMO_RS09655 WP_015815903.1 1880067..1880762(-) (dsbA2) [Neisseria meningitidis alpha14]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCGTTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAATTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB C6S907

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

99.134

100

0.991

  dsbA1 Neisseria meningitidis MC58

70.386

100

0.71


Multiple sequence alignment