Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   NMO_RS09030 Genome accession   NC_013016
Coordinates   1765272..1765916 (-) Length   214 a.a.
NCBI ID   WP_002220358.1    Uniprot ID   A0A0U1RK99
Organism   Neisseria meningitidis alpha14     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1760272..1770916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMO_RS08995 (NMO_1628) ftsL 1760651..1760914 (-) 264 WP_002232818.1 cell division protein FtsL -
  NMO_RS09000 (NMO_1629) rsmH 1760911..1761897 (-) 987 WP_002244453.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  NMO_RS09005 (NMO_1630) mraZ 1761894..1762349 (-) 456 WP_002222027.1 division/cell wall cluster transcriptional repressor MraZ -
  NMO_RS09010 (NMO_1631) - 1762628..1763845 (+) 1218 WP_015815856.1 class I SAM-dependent methyltransferase -
  NMO_RS09025 (NMO_1632) - 1764418..1765239 (-) 822 WP_015815857.1 undecaprenyl-diphosphate phosphatase -
  NMO_RS09030 (NMO_1633) dsbA1 1765272..1765916 (-) 645 WP_002220358.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMO_RS09035 (NMO_1634) ftsN 1765919..1766782 (-) 864 WP_002240285.1 cell division protein FtsN -
  NMO_RS09040 (NMO_1635) comM 1766888..1768384 (-) 1497 WP_002245890.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NMO_RS09045 (NMO_1636) - 1768398..1768718 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  NMO_RS09055 (NMO_1637) putP 1769201..1770727 (+) 1527 WP_002251064.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23970.99 Da        Isoelectric Point: 10.0160

>NTDB_id=34981 NMO_RS09030 WP_002220358.1 1765272..1765916(-) (dsbA1) [Neisseria meningitidis alpha14]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVKLSGLKYQANPAVFKAVYEQKIRLENRSVAEKWALSQKGFDGKKLMRAYDSPAAAAAASKMQQ
LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=34981 NMO_RS09030 WP_002220358.1 1765272..1765916(-) (dsbA1) [Neisseria meningitidis alpha14]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAAAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTAAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCAGGTTTGAAATATCAGGCAAA
CCCTGCCGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGTCGGTTGCCGAAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTACGACTCTCCTGCGGCAGCGGCTGCTGCATCAAAAATGCAGCAA
TTGACGGAACAGTACCGCATCGACAGTACGCCGACCGTTGTCGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGTGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(86-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U1RK99

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

55.851

87.85

0.491
  dsbA2 Neisseria meningitidis MC58

50.538

86.916

0.439

Multiple sequence alignment