Detailed information NTG0349601

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EYS44_RS01995
• Genome accession: NZ_CP037417
• Coordinates: 419311..420459 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LB002
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 414311..425459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYS44_RS01975 (EYS44_01975)	-	414708..415391 (-)	684	WP_015388709.1	ABC transporter ATP-binding protein	-
EYS44_RS01980 (EYS44_01980)	-	415406..416842 (-)	1437	WP_024084884.1	ABC transporter permease	-
EYS44_RS01985 (EYS44_01985)	-	417055..417738 (+)	684	WP_024084885.1	response regulator transcription factor	-
EYS44_RS01990 (EYS44_01990)	-	417725..419158 (+)	1434	WP_161625271.1	HAMP domain-containing sensor histidine kinase	-
EYS44_RS01995 (EYS44_01995)	rapC	419311..420459 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
EYS44_RS02000 (EYS44_02000)	phrC	420443..420562 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
EYS44_RS02005 (EYS44_02005)	-	420712..420807 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
EYS44_RS02010 (EYS44_02010)	-	420902..422266 (-)	1365	WP_003156333.1	aspartate kinase	-
EYS44_RS02015 (EYS44_02015)	ceuB	422681..423634 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
EYS44_RS02020 (EYS44_02020)	-	423624..424571 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
EYS44_RS02025 (EYS44_02025)	-	424565..425323 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=349601 EYS44_RS01995 WP_003156336.1 419311..420459(+) (rapC) [Bacillus velezensis strain LB002]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=349601 EYS44_RS01995 WP_003156336.1 419311..420459(+) (rapC) [Bacillus velezensis strain LB002]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTTTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568