Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   TERTU_RS01035 Genome accession   NC_012997
Coordinates   246949..247344 (+) Length   131 a.a.
NCBI ID   WP_015818072.1    Uniprot ID   -
Organism   Teredinibacter turnerae T7901     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 241949..252344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TERTU_RS01010 (TERTU_0226) pilU 242586..243728 (+) 1143 WP_015819970.1 PilT/PilU family type 4a pilus ATPase Machinery gene
  TERTU_RS01015 (TERTU_0227) ruvX 243767..244207 (-) 441 WP_015820484.1 Holliday junction resolvase RuvX -
  TERTU_RS01020 (TERTU_0228) - 244200..244778 (-) 579 WP_015819114.1 YqgE/AlgH family protein -
  TERTU_RS01025 (TERTU_0229) - 244862..245743 (-) 882 WP_041590003.1 TonB family protein -
  TERTU_RS01030 (TERTU_0230) gshB 245743..246702 (-) 960 WP_015819723.1 glutathione synthase -
  TERTU_RS01035 (TERTU_0231) pilG 246949..247344 (+) 396 WP_015818072.1 twitching motility response regulator PilG Regulator
  TERTU_RS01040 (TERTU_0232) pilH 247390..247752 (+) 363 WP_015818447.1 twitching motility response regulator PilH -
  TERTU_RS01045 (TERTU_0233) - 247797..248336 (+) 540 WP_015817751.1 chemotaxis protein CheW -
  TERTU_RS01050 (TERTU_0234) - 248496..250697 (+) 2202 WP_015817436.1 methyl-accepting chemotaxis protein -
  TERTU_RS01055 (TERTU_0235) - 250715..251572 (+) 858 WP_015817116.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14359.72 Da        Isoelectric Point: 7.8541

>NTDB_id=34902 TERTU_RS01035 WP_015818072.1 246949..247344(+) (pilG) [Teredinibacter turnerae T7901]
MDVNLEHLKVMVIDDSKTIRRTAETLLQKVGCTVVTATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKGELIGAIEAHVKVARAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=34902 TERTU_RS01035 WP_015818072.1 246949..247344(+) (pilG) [Teredinibacter turnerae T7901]
ATGGACGTTAATCTAGAGCACTTGAAAGTGATGGTTATCGACGACAGTAAAACCATCCGGCGAACAGCGGAAACGCTGTT
GCAAAAAGTCGGTTGTACTGTGGTCACGGCAACGGATGGGTTTGATGCCCTCGCAAAAATTGCCGACACCCGTCCAGACA
TCATTTTTGTCGACATTATGATGCCCCGTCTCGACGGTTATCAAACCTGTGCACTGATCAAAAACAACAGTGAATTCAAA
TCGACACCCGTAATAATGCTTTCCAGTAAAGATGGTCTTTTCGACAAGGCGAAGGGCCGTATTGTGGGTTCAGACCAGTA
CCTGACAAAGCCGTTCAGCAAGGGTGAGCTGATCGGCGCGATCGAAGCCCATGTGAAAGTGGCTCGCGCGAGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

95.42

0.71
  vicR Streptococcus mutans UA159

41.525

90.076

0.374

Multiple sequence alignment