Detailed information NTG0348930

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: GJE05_RS05230
• Genome accession: NZ_CP045960
• Coordinates: 974410..975654 (-)
• Length: 414 a.a.
• NCBI ID: WP_002216990.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain AUSMDU00005726
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 969410..980654

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJE05_RS05205 (GJE05_05205)	-	969732..971120 (+)	1389	WP_002229586.1	DEAD/DEAH box helicase	-
GJE05_RS05210 (GJE05_05210)	-	971395..971595 (-)	201	WP_019273652.1	hypothetical protein	-
GJE05_RS05215 (GJE05_05215)	-	971609..972163 (-)	555	WP_002216993.1	hypothetical protein	-
GJE05_RS05220 (GJE05_05220)	-	972248..972748 (-)	501	WP_002229590.1	hypothetical protein	-
GJE05_RS05225 (GJE05_05225)	-	973152..974345 (+)	1194	WP_002229579.1	acetylornithine/succinyldiaminopimelate transaminase	-
GJE05_RS05230 (GJE05_05230)	clpX	974410..975654 (-)	1245	WP_002216990.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
GJE05_RS05235 (GJE05_05235)	rbfA	975844..976215 (+)	372	WP_002229587.1	30S ribosome-binding factor RbfA	-
GJE05_RS05240 (GJE05_05240)	truB	976248..977171 (+)	924	WP_002229593.1	tRNA pseudouridine(55) synthase TruB	-
GJE05_RS11470	-	977388..977867 (+)	480	WP_180298732.1	site-specific DNA-methyltransferase	-
GJE05_RS11705 (GJE05_05245)	-	977797..979578 (+)	1782	WP_228776685.1	site-specific DNA-methyltransferase	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 45101.45 Da
• Isoelectric Point: 4.8213

>NTDB_id=348930 GJE05_RS05230 WP_002216990.1 974410..975654(-) (clpX) [Neisseria meningitidis strain AUSMDU00005726]
MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHEDGNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIG
QEQAKKALAVSVYNHYKRLRHPKAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDT
TNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDA
LINILTEPKNALVKQYQALFGMENVELEFEEGALRSIAWQAMERKTGARGLRSIVERCLLDTMYRLPDLQGLKKVVVGKA
VIEEGKEPELVFES

Nucleotide

• Length: 1245 bp

>NTDB_id=348930 GJE05_RS05230 WP_002216990.1 974410..975654(-) (clpX) [Neisseria meningitidis strain AUSMDU00005726]
ATGTCCAACGAAAACCGTACCTGTTCCTTTTGCGGAAAATCCAAATCACACGTCAAACATTTAATTGAGGGCGAAAACGC
CTTTATCTGTGACGAATGCGTCTCAAACTGTATTGAAATATTGCATGAAGACGGAAATGACGGCACGCCTTCGGAAAGTG
CCGGAGGGGAGCCGGAAGAATCCGGCAAGCTCCCCACGCCCGCCGAAATCGTCGCCAACCTCAACGACCACGTTATCGGT
CAGGAACAAGCCAAGAAAGCCTTGGCGGTGTCGGTGTACAACCATTACAAACGCCTGCGCCACCCGAAAGCCGGAGCTAA
TGTCGAATTGTCGAAATCCAACATCCTGCTTATCGGCCCGACCGGATCGGGTAAAACCCTGCTGGCGCAATCTTTGGCGC
GCAAACTGGATGTGCCGTTCGTGATGGCAGATGCAACCACGCTGACCGAAGCAGGTTATGTCGGCGAAGATGTCGAGCAA
ATCATCACCAAACTCTTGGGCAAATGTGATTTCGATGTCGAAAAAGCCCAACGCGGCATCGTCTATATCGACGAAATCGA
TAAGATTTCACGCAAAAGCGACAATCCGTCCATCACGCGTGACGTGTCCGGCGAAGGCGTGCAACAAGCCTTGCTGAAAC
TGATTGAAGGTACGGTGGCCAGCGTTCCGCCCCAAGGCGGCCGCAAGCATCCGAATCAGGAATTTATCAACGTCGATACC
ACCAACATCCTGTTTATCTGCGGCGGCGCGTTTGCAGGCTTGGAAAAAGTCATCCGCCAGCGTACTGAAAAAGGCGGTAT
CGGTTTCGGTGCGTCCGTTCACAGCAAGGACGAAAATGCCGACATTACCAAGCTGTTCGGCATCGTCGAACCGGAAGATT
TAATCAAATTCGGTCTGATTCCGGAATTAATCGGACGTTTGCCTGTGATTGCAACGTTAGAAGAACTGGATGAGGACGCG
CTGATTAATATTTTGACCGAGCCGAAAAACGCTTTGGTCAAGCAGTATCAAGCCTTGTTCGGTATGGAAAATGTCGAGTT
GGAATTTGAAGAAGGCGCATTGCGTTCCATTGCGTGGCAGGCAATGGAGCGCAAAACCGGCGCGCGCGGCCTGCGTTCCA
TCGTCGAACGCTGCCTGCTCGATACGATGTACCGCCTGCCTGATTTGCAAGGCTTGAAAAAAGTGGTGGTCGGTAAGGCA
GTCATCGAAGAGGGCAAGGAACCGGAATTGGTGTTCGAGTCCTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-387)

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (7-43)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	55.797	100	0.558
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.39	99.034	0.539