Detailed information NTG0348887

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: GJE16_RS10605
• Genome accession: NZ_CP045931
• Coordinates: 2074577..2075674 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain AUSMDU00010538
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2069577..2080674

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJE16_RS10580 (GJE16_10580)	pgsA	2070098..2070643 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
GJE16_RS10585 (GJE16_10585)	rodZ	2070654..2071475 (-)	822	WP_001227957.1	cytoskeleton protein RodZ	-
GJE16_RS10590 (GJE16_10590)	yfmH	2071517..2072800 (-)	1284	WP_000170215.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
GJE16_RS10595 (GJE16_10595)	yfmF	2072797..2074047 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
GJE16_RS10600 (GJE16_10600)	yaaA	2074206..2074574 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
GJE16_RS10605 (GJE16_10605)	recF	2074577..2075674 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
GJE16_RS10610 (GJE16_10610)	guaB	2075725..2077203 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
GJE16_RS10615 (GJE16_10615)	trpS	2077355..2078380 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
GJE16_RS10620 (GJE16_10620)	-	2078586..2080208 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=348887 GJE16_RS10605 WP_000266660.1 2074577..2075674(+) (recF) [Streptococcus pneumoniae strain AUSMDU00010538]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=348887 GJE16_RS10605 WP_000266660.1 2074577..2075674(+) (recF) [Streptococcus pneumoniae strain AUSMDU00010538]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGTCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46