Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | GIY05_RS12720 | Genome accession | NZ_CP045916 |
| Coordinates | 2690218..2690862 (+) | Length | 214 a.a. |
| NCBI ID | WP_003090351.1 | Uniprot ID | A0A0H2ZC55 |
| Organism | Pseudomonas aeruginosa strain CF39S | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2685218..2695862
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GIY05_RS12705 | - | 2685852..2687066 (+) | 1215 | WP_003097556.1 | MFS transporter | - |
| GIY05_RS12710 | - | 2687082..2688110 (-) | 1029 | WP_003097554.1 | AraC family transcriptional regulator | - |
| GIY05_RS12715 | pqsH | 2688728..2689876 (+) | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| GIY05_RS12720 | letA | 2690218..2690862 (+) | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| GIY05_RS12725 | uvrC | 2690863..2692689 (+) | 1827 | WP_003097551.1 | excinuclease ABC subunit UvrC | - |
| GIY05_RS12730 | pgsA | 2692723..2693283 (+) | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| GIY05_RS12740 | - | 2693654..2695597 (+) | 1944 | WP_012614046.1 | integrase arm-type DNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23608.53 Da Isoelectric Point: 6.1073
>NTDB_id=348463 GIY05_RS12720 WP_003090351.1 2690218..2690862(+) (letA) [Pseudomonas aeruginosa strain CF39S]
MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIGGLEATRKLLRSQPDIKVVV
VTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALM
IANCHKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDAAS
MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIGGLEATRKLLRSQPDIKVVV
VTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALM
IANCHKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDAAS
Nucleotide
Download Length: 645 bp
>NTDB_id=348463 GIY05_RS12720 WP_003090351.1 2690218..2690862(+) (letA) [Pseudomonas aeruginosa strain CF39S]
GTGATTAAGGTGCTGGTGGTCGACGACCACGATCTGGTACGCACCGGTATTACCCGCATGCTGGCCGACATCGAAGGCTT
GCAAGTGGTCGGCCAGGCCGACTGCGGTGAAGACTGTCTGAAACTGGCCCGCGAACTGAAGCCGGATGTCGTCCTGATGG
ACGTGAAGATGCCCGGTATCGGCGGCCTGGAGGCAACCCGCAAGCTGCTGCGCAGCCAGCCCGACATCAAGGTCGTGGTA
GTCACCGTCTGCGAAGAGGATCCGTTCCCCACCCGCCTCATGCAGGCCGGCGCCGCCGGCTACATGACCAAGGGCGCGGG
GCTGGAGGAAATGGTCCAGGCGATTCGCCAGGTCTTCGCCGGCCAGCGCTATATCAGCCCGCAGATCGCCCAGCAACTGG
CGCTGAAGTCCTTCCAGCCGCAGCAGCACGATTCCCCCTTCGATTCGCTGTCCGAGCGCGAGATCCAGATCGCCCTGATG
ATCGCCAACTGCCACAAGGTGCAGAGCATCTCCGACAAGCTGTGCCTGTCGCCGAAGACCGTGAATACCTATCGCTACCG
CATCTTCGAGAAGCTCTCGATCACCAGCGACGTGGAGCTGGCGCTGCTCGCCGTCCGCCACGGCATGGTCGATGCCGCCA
GCTAG
GTGATTAAGGTGCTGGTGGTCGACGACCACGATCTGGTACGCACCGGTATTACCCGCATGCTGGCCGACATCGAAGGCTT
GCAAGTGGTCGGCCAGGCCGACTGCGGTGAAGACTGTCTGAAACTGGCCCGCGAACTGAAGCCGGATGTCGTCCTGATGG
ACGTGAAGATGCCCGGTATCGGCGGCCTGGAGGCAACCCGCAAGCTGCTGCGCAGCCAGCCCGACATCAAGGTCGTGGTA
GTCACCGTCTGCGAAGAGGATCCGTTCCCCACCCGCCTCATGCAGGCCGGCGCCGCCGGCTACATGACCAAGGGCGCGGG
GCTGGAGGAAATGGTCCAGGCGATTCGCCAGGTCTTCGCCGGCCAGCGCTATATCAGCCCGCAGATCGCCCAGCAACTGG
CGCTGAAGTCCTTCCAGCCGCAGCAGCACGATTCCCCCTTCGATTCGCTGTCCGAGCGCGAGATCCAGATCGCCCTGATG
ATCGCCAACTGCCACAAGGTGCAGAGCATCTCCGACAAGCTGTGCCTGTCGCCGAAGACCGTGAATACCTATCGCTACCG
CATCTTCGAGAAGCTCTCGATCACCAGCGACGTGGAGCTGGCGCTGCTCGCCGTCCGCCACGGCATGGTCGATGCCGCCA
GCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
54.502 |
98.598 |
0.537 |
| letA | Legionella pneumophila strain ERS1305867 |
54.502 |
98.598 |
0.537 |