Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EYB51_RS18600 Genome accession   NZ_CP036356
Coordinates   3330591..3330767 (+) Length   58 a.a.
NCBI ID   WP_087965781.1    Uniprot ID   -
Organism   Bacillus sp. SYJ     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3325591..3335767
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYB51_RS18580 clpC 3325924..3328524 (+) 2601 WP_087965510.1 ATP-dependent chaperone ClpB Regulator
  EYB51_RS18585 - 3328562..3328744 (-) 183 WP_001211116.1 YjzD family protein -
  EYB51_RS18590 - 3328901..3329635 (+) 735 WP_000028705.1 hypothetical protein -
  EYB51_RS18595 - 3329665..3330537 (+) 873 WP_131101622.1 NAD(P)-dependent oxidoreductase -
  EYB51_RS18600 comZ 3330591..3330767 (+) 177 WP_087965781.1 ComZ family protein Regulator
  EYB51_RS18605 fabH 3331162..3332094 (+) 933 WP_087965508.1 beta-ketoacyl-ACP synthase III -
  EYB51_RS18610 fabF 3332125..3333363 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  EYB51_RS18615 - 3333470..3334258 (+) 789 WP_029437837.1 DUF2268 domain-containing putative Zn-dependent protease -
  EYB51_RS18620 - 3334401..3335147 (+) 747 WP_029437838.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6549.67 Da        Isoelectric Point: 4.3010

>NTDB_id=348170 EYB51_RS18600 WP_087965781.1 3330591..3330767(+) (comZ) [Bacillus sp. SYJ]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMSEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=348170 EYB51_RS18600 WP_087965781.1 3330591..3330767(+) (comZ) [Bacillus sp. SYJ]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGACATGGAGAAAGCTCAGCCAGTATTAGAGTTATTGATGAAAGTTATGAGCGAAGCATATGAGCTTGGAA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment