Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   EYB51_RS05860 Genome accession   NZ_CP036356
Coordinates   909458..910252 (-) Length   264 a.a.
NCBI ID   WP_033686380.1    Uniprot ID   A0A4Y6EYG5
Organism   Bacillus sp. SYJ     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 904458..915252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYB51_RS05835 - 905927..907450 (-) 1524 WP_131100710.1 glycosyltransferase family 39 protein -
  EYB51_RS05840 - 907746..907910 (-) 165 Protein_935 sporulation initiation factor Spo0A C-terminal domain-containing protein -
  EYB51_RS05845 - 907932..908546 (-) 615 WP_087966035.1 hypothetical protein -
  EYB51_RS05850 - 908530..908733 (-) 204 WP_240687577.1 hypothetical protein -
  EYB51_RS05855 - 908735..908878 (-) 144 WP_240687578.1 hypothetical protein -
  EYB51_RS05860 spo0A 909458..910252 (-) 795 WP_033686380.1 sporulation transcription factor Spo0A Regulator
  EYB51_RS05870 spoIVB 910540..911838 (-) 1299 WP_071726705.1 SpoIVB peptidase -
  EYB51_RS05875 recN 911957..913696 (-) 1740 WP_071726704.1 DNA repair protein RecN Machinery gene
  EYB51_RS05880 argR 913964..914413 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4718

>NTDB_id=348140 EYB51_RS05860 WP_033686380.1 909458..910252(-) (spo0A) [Bacillus sp. SYJ]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=348140 EYB51_RS05860 WP_033686380.1 909458..910252(-) (spo0A) [Bacillus sp. SYJ]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGTTATGTAGCTGCCCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TTTTAGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGTCAAGAAGATGTGACGAAAAAAGCGGTTGACTTAGGTGCTTCCTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCAAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAATTTAGATGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGATATATGTATTTAAGAGAAGCAATCTCTATGGTGTACAACGATATCGAATTACT
TGGATCTATTACAAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCATGCAATTGAAGTAGCGTGGAGTCGTGGGAATATAGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTTAGACTTGAGCATAAGGCTTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4Y6EYG5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818


Multiple sequence alignment