Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GII77_RS10290 Genome accession   NZ_CP045825
Coordinates   2003847..2004464 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain 75     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1998847..2009464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII77_RS10265 (GII77_10265) yndJ 1999176..2000816 (+) 1641 WP_015252007.1 YndJ family protein -
  GII77_RS10270 (GII77_10270) - 2000894..2001208 (+) 315 WP_003245621.1 hypothetical protein -
  GII77_RS10275 (GII77_10275) pghL 2001433..2002191 (+) 759 WP_015252005.1 gamma-polyglutamate hydrolase PghL -
  GII77_RS10280 (GII77_10280) - 2002218..2002667 (-) 450 WP_044052523.1 YndM family protein -
  GII77_RS10285 (GII77_10285) fosM 2002878..2003297 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  GII77_RS21670 - 2003221..2003560 (+) 340 Protein_1989 hypothetical protein -
  GII77_RS10290 (GII77_10290) dinR/lexA 2003847..2004464 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  GII77_RS10295 (GII77_10295) yneA 2004614..2004931 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  GII77_RS10300 (GII77_10300) dinL 2004950..2005603 (+) 654 WP_048654895.1 recombinase family protein -
  GII77_RS10305 (GII77_10305) ynzC 2005667..2005900 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  GII77_RS10310 (GII77_10310) recP/tkt 2006069..2008072 (+) 2004 WP_014476936.1 transketolase Machinery gene
  GII77_RS10315 (GII77_10315) sirA 2008225..2008671 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  GII77_RS10320 (GII77_10320) yneF 2008757..2008975 (+) 219 WP_003221221.1 YneF family protein -
  GII77_RS10325 (GII77_10325) ynzD 2009049..2009222 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=347875 GII77_RS10290 WP_003238209.1 2003847..2004464(-) (dinR/lexA) [Bacillus subtilis strain 75]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=347875 GII77_RS10290 WP_003238209.1 2003847..2004464(-) (dinR/lexA) [Bacillus subtilis strain 75]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1