Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   GII78_RS20010 Genome accession   NZ_CP045824
Coordinates   3826701..3827075 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain MB8_B10     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3821701..3832075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII78_RS19985 (GII78_19985) - 3821865..3822026 (-) 162 WP_003227632.1 hypothetical protein -
  GII78_RS19990 (GII78_19990) glpX 3822241..3823206 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  GII78_RS19995 (GII78_19995) murAB 3823237..3824526 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  GII78_RS20000 (GII78_20000) fsa 3824905..3825543 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  GII78_RS20005 (GII78_20005) fbaA 3825663..3826520 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  GII78_RS20010 (GII78_20010) letA 3826701..3827075 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  GII78_RS20015 (GII78_20015) ywjG 3827241..3827762 (+) 522 WP_029726065.1 DUF2529 domain-containing protein -
  GII78_RS20020 (GII78_20020) pyrG 3827844..3829451 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  GII78_RS20025 (GII78_20025) rpoE 3829693..3830214 (-) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  GII78_RS20030 (GII78_20030) acdA 3830397..3831536 (-) 1140 WP_029726066.1 acyl-CoA dehydrogenase AcdA -

Sequence


Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=347789 GII78_RS20010 WP_003227621.1 3826701..3827075(-) (letA) [Bacillus subtilis strain MB8_B10]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=347789 GII78_RS20010 WP_003227621.1 3826701..3827075(-) (letA) [Bacillus subtilis strain MB8_B10]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363

  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363


Multiple sequence alignment