Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   GII80_RS19875 Genome accession   NZ_CP045821
Coordinates   3790394..3790768 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain MB8_B7     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3785394..3795768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII80_RS19850 (GII80_19850) - 3785558..3785719 (-) 162 WP_003227632.1 hypothetical protein -
  GII80_RS19855 (GII80_19855) glpX 3785934..3786899 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  GII80_RS19860 (GII80_19860) murAB 3786930..3788219 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  GII80_RS19865 (GII80_19865) fsa 3788598..3789236 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  GII80_RS19870 (GII80_19870) fbaA 3789356..3790213 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  GII80_RS19875 (GII80_19875) letA 3790394..3790768 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  GII80_RS19880 (GII80_19880) ywjG 3790934..3791455 (+) 522 WP_003242809.1 DUF2529 domain-containing protein -
  GII80_RS19885 (GII80_19885) pyrG 3791537..3793144 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  GII80_RS19890 (GII80_19890) rpoE 3793386..3793907 (-) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  GII80_RS19895 (GII80_19895) acdA 3794090..3795229 (-) 1140 WP_003242719.1 acyl-CoA dehydrogenase AcdA -

Sequence


Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=347484 GII80_RS19875 WP_003227621.1 3790394..3790768(-) (letA) [Bacillus subtilis strain MB8_B7]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=347484 GII80_RS19875 WP_003227621.1 3790394..3790768(-) (letA) [Bacillus subtilis strain MB8_B7]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTGTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363

  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363


Multiple sequence alignment