Detailed information NTG0347398

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: Pstu14405_RS03855
• Genome accession: NZ_CP036186
• Coordinates: 858201..859538 (-)
• Length: 445 a.a.
• NCBI ID: WP_003283124.1
• Uniprot ID: A0A2N8RAN0
• Organism: Stutzerimonas stutzeri strain ATCC 14405
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 853201..864538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Pstu14405_RS03845 (Pstu14405_03855)	-	855257..856852 (-)	1596	WP_003283122.1	response regulator	-
Pstu14405_RS03850 (Pstu14405_03860)	-	857070..858128 (+)	1059	WP_003283123.1	DUF2333 family protein	-
Pstu14405_RS03855 (Pstu14405_03865)	pilR	858201..859538 (-)	1338	WP_003283124.1	sigma-54-dependent transcriptional regulator	Regulator
Pstu14405_RS03860 (Pstu14405_03870)	pilS	859671..861263 (-)	1593	WP_003283125.1	sensor histidine kinase	Regulator
Pstu14405_RS03865 (Pstu14405_03875)	-	861253..861486 (-)	234	WP_003283126.1	PP0621 family protein	-
Pstu14405_RS03870 (Pstu14405_03880)	-	861606..862595 (-)	990	WP_003283127.1	outer membrane protein assembly factor BamD	-
Pstu14405_RS03875 (Pstu14405_03885)	rluD	862802..863776 (+)	975	WP_003283128.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
Pstu14405_RS03880 (Pstu14405_03890)	pgeF	863773..864510 (+)	738	WP_003283129.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49616.08 Da
• Isoelectric Point: 6.5146

>NTDB_id=347398 Pstu14405_RS03855 WP_003283124.1 858201..859538(-) (pilR) [Stutzerimonas stutzeri strain ATCC 14405]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQYIQQQHPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPMKILRKQIGKLARSQAPVY
ISGESGSGKELVSRLIHEQGPRNEKPFVPVNCGAIPTELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLAEAM
LRRLAQECGDTNARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLSDSSEGSLAHIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=347398 Pstu14405_RS03855 WP_003283124.1 858201..859538(-) (pilR) [Stutzerimonas stutzeri strain ATCC 14405]
ATGACCGCGCGCCAGAAAGCACTGATCATCGATGACGAGCCGGATATCCGCGAGCTGCTGGAAATCACCCTCGGCCGGAT
GAAGCTCGATACCCGCAGCGCACGCAACCTCAAGGAGGCGCGCGAACTGCTGGCCCGCGAGCACTACGATCTGTGCCTGA
CCGATATGCGCCTACCCGATGGCAGCGGCCTGGAACTGGTGCAGTACATCCAGCAACAGCATCCGCAGCTGCCTGTTGCG
ATGATCACCGCGTACGGCAGCCTGGATACCGCCATCGGTGCGCTCAAGGCCGGGGCGTTCGACTTCCTCACCAAACCAGT
GGATCTCAACCGGCTGCGCGAGCTGGTCAGCACCGCTTTACGCCTGCGCGCGCCTGCCGCTGAGGCACCGGTGGACAGCC
GCCTGCTGGGCAGCTCACCCCCCATGAAGATCCTGCGCAAGCAGATCGGCAAGCTCGCCCGTAGCCAGGCGCCGGTCTAT
ATAAGCGGTGAGTCCGGTAGCGGAAAGGAGCTTGTGTCCCGCCTGATCCACGAACAAGGCCCACGCAACGAGAAGCCGTT
CGTGCCGGTTAACTGCGGGGCGATCCCTACGGAGCTGATGGAAAGCGAGTTCTTCGGTCACAAGAAGGGCAGTTTCAGCG
GCGCCATCGAAGACAAGCCTGGTCTGTTCCAGGCCGCCAATGGCGGCACGCTATTTCTCGACGAGGTAGCGGACCTACCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCGATTCAGGAAAAGGCCGTTCGCGCGGTCGGCGGCGCCCAGGAAGTAATGGT
CGATGTGCGCATCCTCTGCGCCACCCACAAGGATCTGGCTAGCGAAGTTGCCGCAGGTCGTTTTCGTCAGGACCTGTATT
ACAGACTGAACGTCATCGAACTGCGCGTGCCGCCACTGCGCGAACGCCGCGAGGATATCGGGCTGCTCGCCGAAGCAATG
CTCCGGCGCCTGGCGCAGGAATGTGGCGACACCAACGCCCGCCTACATCCGGATGCGCTGGCAAAGCTGGAGAACTATCG
TTTCCCGGGGAACGTCCGTGAACTGGAGAACATGCTCGAGCGCGCGTACACACTCTGCGAAGGCGACGAGATAAAGGCCG
GCGACCTGCGCCTAGCAGACAGCCCAGGCCTGTCCGACAGTAGCGAAGGCAGCCTGGCGCACATCGATAATCTGGAAGAT
CATCTGGAAGAGATCGAGCGCAAGTTGATCATGCAGGCGTTGGAAGAAACTCGCTGGAACCGCACAGCGGCGGCCCAGCG
CCTGGGTCTGACCTTCCGCTCGATGCGCTACCGACTGAAAAAGCTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

3D structure

• AlphaFold DB: A0A2N8RAN0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.586	99.775	0.854
pilR	Acinetobacter baumannii strain A118	49.673	100	0.512
luxO	Vibrio cholerae strain A1552	38.031	100	0.382