Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Pstu14405_RS02110 Genome accession   NZ_CP036186
Coordinates   452246..452653 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain ATCC 14405     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 447246..457653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Pstu14405_RS02080 (Pstu14405_02075) - 447415..448431 (-) 1017 WP_003282735.1 aspartate carbamoyltransferase catalytic subunit -
  Pstu14405_RS02085 (Pstu14405_02080) pyrR 448487..448999 (-) 513 WP_003282734.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  Pstu14405_RS02090 (Pstu14405_02085) ruvX 449021..449449 (-) 429 WP_003282733.1 Holliday junction resolvase RuvX -
  Pstu14405_RS02095 (Pstu14405_02090) - 449446..450015 (-) 570 WP_003282732.1 YqgE/AlgH family protein -
  Pstu14405_RS02100 (Pstu14405_02095) - 450079..450972 (-) 894 WP_036991428.1 energy transducer TonB -
  Pstu14405_RS02105 (Pstu14405_02100) gshB 451060..452010 (-) 951 WP_003282730.1 glutathione synthase -
  Pstu14405_RS02110 (Pstu14405_02105) pilG 452246..452653 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  Pstu14405_RS02115 (Pstu14405_02110) pilH 452697..453062 (+) 366 WP_003282728.1 twitching motility response regulator PilH -
  Pstu14405_RS02120 (Pstu14405_02115) - 453104..453640 (+) 537 WP_003282727.1 chemotaxis protein CheW -
  Pstu14405_RS02125 (Pstu14405_02120) - 453721..455769 (+) 2049 WP_003282725.1 methyl-accepting chemotaxis protein -
  Pstu14405_RS02130 (Pstu14405_02125) - 455831..456697 (+) 867 WP_003282724.1 protein-glutamate O-methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=347397 Pstu14405_RS02110 WP_003282729.1 452246..452653(+) (pilG) [Stutzerimonas stutzeri strain ATCC 14405]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=347397 Pstu14405_RS02110 WP_003282729.1 452246..452653(+) (pilG) [Stutzerimonas stutzeri strain ATCC 14405]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGTACCGCTGAAACCCTGCT
GAAGAAAGTAGGATGCGATGTCATCACCGCAGTGGACGGTTTCGATGCGCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTCGTCGATATTATGATGCCTAGGCTGGACGGCTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCTAAAGGGCGTATTGTCGGTTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCGCATGTGCCTGATTTTGCACCGGTGGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment