Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EXW56_RS19030 Genome accession   NZ_CP036132
Coordinates   3743881..3744339 (+) Length   152 a.a.
NCBI ID   WP_002066920.1    Uniprot ID   A0A366GHE8
Organism   Bacillus mycoides strain JAS823     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3738881..3749339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW56_RS19015 (EXW56_19410) - 3739545..3739781 (+) 237 WP_002199486.1 hypothetical protein -
  EXW56_RS19020 (EXW56_19415) - 3739948..3742056 (-) 2109 WP_002160668.1 polyphosphate kinase -
  EXW56_RS19025 (EXW56_19420) - 3742165..3743739 (-) 1575 WP_080013692.1 Ppx/GppA family phosphatase -
  EXW56_RS19030 (EXW56_19425) kre 3743881..3744339 (+) 459 WP_002066920.1 YkyB family protein Regulator
  EXW56_RS19035 (EXW56_19430) - 3744371..3745033 (-) 663 WP_002066948.1 YkyA family protein -
  EXW56_RS19040 (EXW56_19435) - 3745596..3746249 (-) 654 WP_215596852.1 diguanylate cyclase -
  EXW56_RS19045 (EXW56_19440) - 3746414..3746647 (+) 234 WP_002199483.1 phage holin -
  EXW56_RS19050 (EXW56_19445) - 3746679..3747179 (-) 501 WP_002111526.1 hypothetical protein -
  EXW56_RS19055 (EXW56_19450) - 3747664..3749205 (+) 1542 WP_215596853.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17758.44 Da        Isoelectric Point: 10.6793

>NTDB_id=347033 EXW56_RS19030 WP_002066920.1 3743881..3744339(+) (kre) [Bacillus mycoides strain JAS823]
MKPSQPQSQLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEAVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=347033 EXW56_RS19030 WP_002066920.1 3743881..3744339(+) (kre) [Bacillus mycoides strain JAS823]
ATGAAACCTTCACAACCCCAATCTCAATTACATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCCTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGCGAAGCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GHE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487

Multiple sequence alignment