Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW56_RS06055 Genome accession   NZ_CP036132
Coordinates   1199542..1200225 (+) Length   227 a.a.
NCBI ID   WP_002201376.1    Uniprot ID   J7XD20
Organism   Bacillus mycoides strain JAS823     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1194542..1205225
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW56_RS06035 (EXW56_06185) - 1195525..1197171 (+) 1647 WP_002158887.1 peptide ABC transporter substrate-binding protein -
  EXW56_RS06040 (EXW56_06190) - 1197201..1197404 (-) 204 WP_000559981.1 hypothetical protein -
  EXW56_RS06045 (EXW56_06195) spx 1197984..1198379 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  EXW56_RS06050 (EXW56_06200) - 1198430..1199104 (-) 675 WP_002201377.1 TerC family protein -
  EXW56_RS06055 (EXW56_06205) mecA 1199542..1200225 (+) 684 WP_002201376.1 adaptor protein MecA Regulator
  EXW56_RS06060 (EXW56_06210) - 1200298..1201842 (+) 1545 WP_002201375.1 cardiolipin synthase -
  EXW56_RS06065 (EXW56_06215) - 1201933..1203168 (+) 1236 WP_215597567.1 competence protein CoiA family protein -
  EXW56_RS06070 (EXW56_06220) pepF 1203219..1205045 (+) 1827 WP_002201373.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27015.14 Da        Isoelectric Point: 4.0116

>NTDB_id=347021 EXW56_RS06055 WP_002201376.1 1199542..1200225(+) (mecA) [Bacillus mycoides strain JAS823]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFVDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=347021 EXW56_RS06055 WP_002201376.1 1199542..1200225(+) (mecA) [Bacillus mycoides strain JAS823]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAACCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTGTCGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAGGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTGGATAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTGCAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTTGATGAAGTGCTACATGATGAAGAAGAGATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB J7XD20

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.825

100

0.551


Multiple sequence alignment