Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | GII85_RS20240 | Genome accession | NZ_CP045817 |
| Coordinates | 3962479..3964662 (+) | Length | 727 a.a. |
| NCBI ID | WP_041850311.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain P5_B1 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3957479..3969662
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII85_RS20215 (GII85_20215) | htpG | 3958404..3960284 (-) | 1881 | WP_003243561.1 | molecular chaperone HtpG | - |
| GII85_RS20220 (GII85_20220) | - | 3960452..3960703 (-) | 252 | WP_003244458.1 | hypothetical protein | - |
| GII85_RS20225 (GII85_20225) | yxbG | 3960820..3961629 (+) | 810 | WP_041850312.1 | SDR family oxidoreductase | - |
| GII85_RS20230 (GII85_20230) | - | 3961931..3962128 (+) | 198 | WP_040081241.1 | Blp family class II bacteriocin | - |
| GII85_RS20235 (GII85_20235) | - | 3962152..3962397 (+) | 246 | WP_040081239.1 | Blp family class II bacteriocin | - |
| GII85_RS20240 (GII85_20240) | comA/nlmT | 3962479..3964662 (+) | 2184 | WP_041850311.1 | peptide cleavage/export ABC transporter | Regulator |
| GII85_RS20245 (GII85_20245) | - | 3964663..3966132 (+) | 1470 | WP_041850310.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| GII85_RS20250 (GII85_20250) | yxbF | 3966650..3967792 (-) | 1143 | WP_041850309.1 | TetR/AcrR family transcriptional regulator | - |
| GII85_RS20255 (GII85_20255) | aldX | 3967935..3969272 (+) | 1338 | WP_153940111.1 | aldehyde dehydrogenase family protein | - |
Sequence
Protein
Download Length: 727 a.a. Molecular weight: 82167.07 Da Isoelectric Point: 8.8892
>NTDB_id=346873 GII85_RS20240 WP_041850311.1 3962479..3964662(+) (comA/nlmT) [Bacillus subtilis strain P5_B1]
MFFKKYQYVKQIDEKDCGAACLATILKHYGSKLSINKIRDIAGTDKQGTSALGLVRAAEQLGFSAKGVKADKTALEEPFT
LPAIAHIILNGQLLHYVVIHKITKDQIIIADPGRGIIKYTKKEFLEVWTGILILLTPSETYKIHVETSTIRSDIFKLILH
QKSLIIHTILASFIITVFGIMGTFYFQTVIDEILPNRLNSTLHILSFGLIIMYLFKVLLTAFRQYLMILLGQKLSISIMF
GYFKHVLSLPMKFFSTRKIGEIISRFNDASKVIDAIISASLSVVLDTVMLVMVGIFLYLQNTTLFLITLAFIPFYVLTVW
FFMKPYESINNTEMENNAQLTSKIVETLNGIETIKAYNAEYMMSYETEKRFVKYLRSAFKHGVIDNLQNSIKMFLDLASG
AFILWIGSTQVMKGTLSIGQLITYNALLTYFLNPLQNIIGLQSKLQSASVASKRLGEILEVEHEIKDKDAQITTPGSING
PIEFIKINFRYGTRRLILKDITLRIDKGEKVAFIGESGSGKSTLTKLLMKFYTAESGDILINGYHINDIHAHSLRESISY
IPQESHFIQGSIFENLLLGNSGSFTFEEIIEVCKQTNVHDFVNDLPMRYDTLVEENGSNLSGGQKQRLAIARALLRKPNI
LIMDESTSNLDTTTEQGISKMIYDQTVGITTIIIAHRLSTIMNCDKIFVMENGEIIEYGNHNDLLKKKGKYYELWENQMP
SRGMVTI
MFFKKYQYVKQIDEKDCGAACLATILKHYGSKLSINKIRDIAGTDKQGTSALGLVRAAEQLGFSAKGVKADKTALEEPFT
LPAIAHIILNGQLLHYVVIHKITKDQIIIADPGRGIIKYTKKEFLEVWTGILILLTPSETYKIHVETSTIRSDIFKLILH
QKSLIIHTILASFIITVFGIMGTFYFQTVIDEILPNRLNSTLHILSFGLIIMYLFKVLLTAFRQYLMILLGQKLSISIMF
GYFKHVLSLPMKFFSTRKIGEIISRFNDASKVIDAIISASLSVVLDTVMLVMVGIFLYLQNTTLFLITLAFIPFYVLTVW
FFMKPYESINNTEMENNAQLTSKIVETLNGIETIKAYNAEYMMSYETEKRFVKYLRSAFKHGVIDNLQNSIKMFLDLASG
AFILWIGSTQVMKGTLSIGQLITYNALLTYFLNPLQNIIGLQSKLQSASVASKRLGEILEVEHEIKDKDAQITTPGSING
PIEFIKINFRYGTRRLILKDITLRIDKGEKVAFIGESGSGKSTLTKLLMKFYTAESGDILINGYHINDIHAHSLRESISY
IPQESHFIQGSIFENLLLGNSGSFTFEEIIEVCKQTNVHDFVNDLPMRYDTLVEENGSNLSGGQKQRLAIARALLRKPNI
LIMDESTSNLDTTTEQGISKMIYDQTVGITTIIIAHRLSTIMNCDKIFVMENGEIIEYGNHNDLLKKKGKYYELWENQMP
SRGMVTI
Nucleotide
Download Length: 2184 bp
>NTDB_id=346873 GII85_RS20240 WP_041850311.1 3962479..3964662(+) (comA/nlmT) [Bacillus subtilis strain P5_B1]
ATGTTCTTTAAAAAGTACCAATATGTAAAACAAATTGATGAAAAAGACTGTGGAGCAGCTTGTCTAGCCACTATATTGAA
GCATTACGGCTCCAAATTATCAATAAATAAAATTCGAGATATTGCGGGAACAGATAAACAAGGCACAAGCGCACTTGGAC
TAGTCAGAGCAGCTGAACAATTAGGCTTTTCAGCAAAAGGAGTAAAAGCTGACAAAACAGCTTTAGAAGAACCCTTTACA
CTGCCGGCTATTGCACATATCATTCTTAATGGACAATTATTACATTATGTTGTTATTCATAAAATTACAAAAGACCAGAT
TATCATTGCAGATCCTGGCCGCGGAATCATTAAGTACACAAAAAAAGAATTTTTAGAGGTTTGGACAGGAATCTTAATTT
TACTGACTCCTTCTGAAACATATAAGATCCATGTAGAGACCAGTACTATACGAAGTGATATATTCAAATTAATACTTCAT
CAAAAATCATTGATCATCCACACAATTTTAGCATCCTTTATCATTACAGTTTTCGGTATTATGGGGACTTTTTATTTTCA
AACGGTCATTGATGAGATTTTACCAAATAGATTGAATAGCACGTTACATATACTTTCATTCGGCCTCATCATTATGTACT
TATTTAAAGTCCTTTTAACAGCCTTTAGGCAATATTTAATGATATTATTGGGCCAAAAATTAAGTATTTCAATAATGTTT
GGTTATTTCAAACATGTACTTAGCTTACCGATGAAGTTTTTTAGCACTAGAAAGATCGGGGAGATTATATCTAGATTTAA
TGATGCTAGCAAAGTAATTGATGCTATTATTAGCGCCTCTCTATCAGTAGTACTTGATACAGTAATGCTTGTAATGGTAG
GCATCTTTTTATATCTACAAAATACAACTTTATTTTTAATTACATTGGCTTTTATCCCATTTTATGTTCTTACAGTTTGG
TTTTTTATGAAGCCATATGAATCCATCAACAATACTGAAATGGAAAACAATGCTCAGCTGACTTCAAAAATAGTTGAGAC
ACTTAACGGTATTGAAACAATTAAAGCATATAATGCTGAATATATGATGTCATATGAGACAGAAAAGAGATTTGTGAAAT
ATTTGCGCTCTGCTTTTAAGCATGGAGTTATCGATAATCTTCAAAATTCTATTAAAATGTTTTTGGATTTAGCAAGTGGA
GCATTCATATTGTGGATTGGTTCAACTCAAGTGATGAAAGGAACTCTTTCAATAGGTCAGCTCATTACATACAATGCATT
GTTAACATATTTTTTGAATCCTTTACAGAACATAATAGGCCTTCAATCGAAACTCCAGTCAGCTTCTGTTGCTTCTAAAC
GACTGGGAGAAATACTAGAAGTAGAACACGAAATAAAAGATAAGGATGCTCAAATAACAACGCCAGGGTCTATTAATGGC
CCAATTGAATTTATTAAAATTAACTTTCGATATGGTACTCGGCGACTAATCCTAAAAGATATTACACTACGTATAGATAA
AGGGGAGAAAGTCGCTTTTATTGGAGAGAGCGGTTCCGGAAAATCTACTCTAACTAAGCTCTTAATGAAATTTTATACAG
CTGAGTCTGGTGATATTTTAATTAATGGTTATCATATCAATGATATTCATGCTCATTCATTAAGAGAAAGTATAAGTTAT
ATCCCTCAAGAATCTCACTTTATACAGGGTTCCATTTTTGAAAACCTTCTGCTCGGTAACTCAGGCAGTTTTACCTTTGA
AGAGATTATAGAAGTATGCAAACAAACAAATGTACACGATTTTGTCAATGATTTACCAATGAGATACGATACTCTCGTAG
AGGAAAACGGGTCTAATTTATCTGGAGGCCAGAAGCAAAGACTCGCAATTGCCAGAGCATTATTAAGAAAACCTAACATT
CTCATAATGGATGAATCAACAAGCAATCTCGATACGACTACCGAACAGGGAATATCAAAAATGATATACGATCAGACTGT
TGGTATAACTACGATTATAATCGCTCACCGTTTGAGTACAATTATGAATTGTGACAAAATATTTGTCATGGAAAATGGAG
AAATCATAGAGTATGGGAACCACAATGATTTATTGAAGAAAAAAGGCAAGTACTATGAGTTGTGGGAGAACCAAATGCCA
TCCAGAGGGATGGTGACTATTTAG
ATGTTCTTTAAAAAGTACCAATATGTAAAACAAATTGATGAAAAAGACTGTGGAGCAGCTTGTCTAGCCACTATATTGAA
GCATTACGGCTCCAAATTATCAATAAATAAAATTCGAGATATTGCGGGAACAGATAAACAAGGCACAAGCGCACTTGGAC
TAGTCAGAGCAGCTGAACAATTAGGCTTTTCAGCAAAAGGAGTAAAAGCTGACAAAACAGCTTTAGAAGAACCCTTTACA
CTGCCGGCTATTGCACATATCATTCTTAATGGACAATTATTACATTATGTTGTTATTCATAAAATTACAAAAGACCAGAT
TATCATTGCAGATCCTGGCCGCGGAATCATTAAGTACACAAAAAAAGAATTTTTAGAGGTTTGGACAGGAATCTTAATTT
TACTGACTCCTTCTGAAACATATAAGATCCATGTAGAGACCAGTACTATACGAAGTGATATATTCAAATTAATACTTCAT
CAAAAATCATTGATCATCCACACAATTTTAGCATCCTTTATCATTACAGTTTTCGGTATTATGGGGACTTTTTATTTTCA
AACGGTCATTGATGAGATTTTACCAAATAGATTGAATAGCACGTTACATATACTTTCATTCGGCCTCATCATTATGTACT
TATTTAAAGTCCTTTTAACAGCCTTTAGGCAATATTTAATGATATTATTGGGCCAAAAATTAAGTATTTCAATAATGTTT
GGTTATTTCAAACATGTACTTAGCTTACCGATGAAGTTTTTTAGCACTAGAAAGATCGGGGAGATTATATCTAGATTTAA
TGATGCTAGCAAAGTAATTGATGCTATTATTAGCGCCTCTCTATCAGTAGTACTTGATACAGTAATGCTTGTAATGGTAG
GCATCTTTTTATATCTACAAAATACAACTTTATTTTTAATTACATTGGCTTTTATCCCATTTTATGTTCTTACAGTTTGG
TTTTTTATGAAGCCATATGAATCCATCAACAATACTGAAATGGAAAACAATGCTCAGCTGACTTCAAAAATAGTTGAGAC
ACTTAACGGTATTGAAACAATTAAAGCATATAATGCTGAATATATGATGTCATATGAGACAGAAAAGAGATTTGTGAAAT
ATTTGCGCTCTGCTTTTAAGCATGGAGTTATCGATAATCTTCAAAATTCTATTAAAATGTTTTTGGATTTAGCAAGTGGA
GCATTCATATTGTGGATTGGTTCAACTCAAGTGATGAAAGGAACTCTTTCAATAGGTCAGCTCATTACATACAATGCATT
GTTAACATATTTTTTGAATCCTTTACAGAACATAATAGGCCTTCAATCGAAACTCCAGTCAGCTTCTGTTGCTTCTAAAC
GACTGGGAGAAATACTAGAAGTAGAACACGAAATAAAAGATAAGGATGCTCAAATAACAACGCCAGGGTCTATTAATGGC
CCAATTGAATTTATTAAAATTAACTTTCGATATGGTACTCGGCGACTAATCCTAAAAGATATTACACTACGTATAGATAA
AGGGGAGAAAGTCGCTTTTATTGGAGAGAGCGGTTCCGGAAAATCTACTCTAACTAAGCTCTTAATGAAATTTTATACAG
CTGAGTCTGGTGATATTTTAATTAATGGTTATCATATCAATGATATTCATGCTCATTCATTAAGAGAAAGTATAAGTTAT
ATCCCTCAAGAATCTCACTTTATACAGGGTTCCATTTTTGAAAACCTTCTGCTCGGTAACTCAGGCAGTTTTACCTTTGA
AGAGATTATAGAAGTATGCAAACAAACAAATGTACACGATTTTGTCAATGATTTACCAATGAGATACGATACTCTCGTAG
AGGAAAACGGGTCTAATTTATCTGGAGGCCAGAAGCAAAGACTCGCAATTGCCAGAGCATTATTAAGAAAACCTAACATT
CTCATAATGGATGAATCAACAAGCAATCTCGATACGACTACCGAACAGGGAATATCAAAAATGATATACGATCAGACTGT
TGGTATAACTACGATTATAATCGCTCACCGTTTGAGTACAATTATGAATTGTGACAAAATATTTGTCATGGAAAATGGAG
AAATCATAGAGTATGGGAACCACAATGATTTATTGAAGAAAAAAGGCAAGTACTATGAGTTGTGGGAGAACCAAATGCCA
TCCAGAGGGATGGTGACTATTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
42.42 |
98.9 |
0.42 |
| comA | Streptococcus mitis SK321 |
41.864 |
98.9 |
0.414 |
| comA | Streptococcus mitis NCTC 12261 |
41.864 |
98.9 |
0.414 |
| comA | Streptococcus pneumoniae R6 |
41.725 |
98.9 |
0.413 |
| comA | Streptococcus pneumoniae Rx1 |
41.725 |
98.9 |
0.413 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
41.725 |
98.9 |
0.413 |
| comA | Streptococcus pneumoniae D39 |
41.725 |
98.9 |
0.413 |
| comA | Streptococcus pneumoniae TIGR4 |
41.586 |
98.9 |
0.411 |