Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW25_RS05960 Genome accession   NZ_CP036111
Coordinates   1164355..1165038 (+) Length   227 a.a.
NCBI ID   WP_000402125.1    Uniprot ID   A0A1V6LLK1
Organism   Bacillus toyonensis strain JAS411     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1159355..1170038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW25_RS05940 (EXW25_06035) - 1160414..1162063 (+) 1650 WP_000728606.1 peptide ABC transporter substrate-binding protein -
  EXW25_RS05945 (EXW25_06040) - 1162094..1162297 (-) 204 WP_000559975.1 hypothetical protein -
  EXW25_RS05950 (EXW25_06045) spx 1162890..1163285 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  EXW25_RS05955 (EXW25_06050) - 1163335..1164009 (-) 675 WP_000362596.1 TerC family protein -
  EXW25_RS05960 (EXW25_06055) mecA 1164355..1165038 (+) 684 WP_000402125.1 adaptor protein MecA Regulator
  EXW25_RS05965 (EXW25_06060) - 1165111..1166655 (+) 1545 WP_097953215.1 cardiolipin synthase -
  EXW25_RS05970 (EXW25_06065) - 1166736..1167980 (+) 1245 WP_215595883.1 competence protein CoiA family protein -
  EXW25_RS05975 (EXW25_06070) pepF 1168031..1169857 (+) 1827 WP_215595884.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27029.10 Da        Isoelectric Point: 3.9823

>NTDB_id=346872 EXW25_RS05960 WP_000402125.1 1164355..1165038(+) (mecA) [Bacillus toyonensis strain JAS411]
MEIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFDDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKERALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=346872 EXW25_RS05960 WP_000402125.1 1164355..1165038(+) (mecA) [Bacillus toyonensis strain JAS411]
TTGGAAATTGAAAGAATTAACGATCATACAATGAAGTTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGACCGCGAACGTAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGACT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCCGAGCTC
TCAAAGGATGGACAAAAGCTAGAGCTACCGATAGGTGTAGACAAAATTATAGACATTCCTTTAGATGAGGGTATCGAGTC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGATGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTGAGTGAGTATGGGAAACAAATTGTGAAAGAGC
GTGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V6LLK1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.263

100

0.555


Multiple sequence alignment