Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SSUBM407_RS09395 Genome accession   NC_012926
Coordinates   1913025..1914284 (-) Length   419 a.a.
NCBI ID   WP_012027845.1    Uniprot ID   A0A0Z8VH60
Organism   Streptococcus suis BM407     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1908025..1919284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSUBM407_RS09370 (SSUBM407_1819) dhaK 1908034..1909023 (+) 990 WP_012027841.1 dihydroxyacetone kinase subunit DhaK -
  SSUBM407_RS09375 (SSUBM407_1820) dhaL 1909034..1909609 (+) 576 WP_012027842.1 dihydroxyacetone kinase subunit DhaL -
  SSUBM407_RS09380 (SSUBM407_1821) dhaM 1909606..1909980 (+) 375 WP_002938758.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  SSUBM407_RS09385 (SSUBM407_1822) - 1909990..1910700 (+) 711 WP_012027843.1 MIP/aquaporin family protein -
  SSUBM407_RS09390 (SSUBM407_1823) - 1910882..1912744 (-) 1863 WP_012027844.1 proline--tRNA ligase -
  SSUBM407_RS09395 (SSUBM407_1824) eeP 1913025..1914284 (-) 1260 WP_012027845.1 M50 family metallopeptidase Regulator
  SSUBM407_RS09400 (SSUBM407_1825) - 1914294..1915100 (-) 807 WP_012027846.1 phosphatidate cytidylyltransferase -
  SSUBM407_RS09405 (SSUBM407_1826) - 1915110..1915865 (-) 756 WP_012775352.1 isoprenyl transferase -
  SSUBM407_RS09410 (SSUBM407_1827) yajC 1915979..1916302 (-) 324 WP_012775696.1 preprotein translocase subunit YajC -
  SSUBM407_RS09415 (SSUBM407_1828) - 1916412..1917704 (-) 1293 WP_012775353.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44889.21 Da        Isoelectric Point: 5.6974

>NTDB_id=34685 SSUBM407_RS09395 WP_012027845.1 1913025..1914284(-) (eeP) [Streptococcus suis BM407]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=34685 SSUBM407_RS09395 WP_012027845.1 1913025..1914284(-) (eeP) [Streptococcus suis BM407]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAATAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTCTTTTGTTCTTCATGCAAGGAGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGTAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCAGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z8VH60

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65

100

0.652

  eeP Streptococcus thermophilus LMD-9

65

100

0.652


Multiple sequence alignment