Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EXW48_RS00525 | Genome accession | NZ_CP036101 |
| Coordinates | 95043..97478 (+) | Length | 811 a.a. |
| NCBI ID | WP_046958120.1 | Uniprot ID | A0A0G8CF99 |
| Organism | Bacillus wiedmannii strain JAS28/2 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 90043..102478
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW48_RS00510 (EXW48_00510) | ctsR | 92768..93229 (+) | 462 | WP_001244556.1 | transcriptional regulator CtsR | - |
| EXW48_RS00515 (EXW48_00515) | - | 93403..93951 (+) | 549 | WP_000128404.1 | UvrB/UvrC motif-containing protein | - |
| EXW48_RS00520 (EXW48_00520) | - | 93956..95020 (+) | 1065 | WP_046958121.1 | protein arginine kinase | - |
| EXW48_RS00525 (EXW48_00525) | clpC | 95043..97478 (+) | 2436 | WP_046958120.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| EXW48_RS00530 (EXW48_00530) | radA | 97575..98951 (+) | 1377 | WP_001085205.1 | DNA repair protein RadA | Machinery gene |
| EXW48_RS00535 (EXW48_00535) | disA | 98955..100028 (+) | 1074 | WP_000392165.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| EXW48_RS00540 (EXW48_00540) | - | 100191..101294 (+) | 1104 | WP_000919686.1 | PIN/TRAM domain-containing protein | - |
| EXW48_RS00545 (EXW48_00545) | ispD | 101311..101991 (+) | 681 | WP_046958119.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90529.35 Da Isoelectric Point: 6.4868
>NTDB_id=346761 EXW48_RS00525 WP_046958120.1 95043..97478(+) (clpC) [Bacillus wiedmannii strain JAS28/2]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVQLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHNRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVKRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVQLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHNRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVKRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=346761 EXW48_RS00525 WP_046958120.1 95043..97478(+) (clpC) [Bacillus wiedmannii strain JAS28/2]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACACATTTTACTTGGGCTTGTACGCGAAGGGGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GGTTAAGTCCAGAGAAGGTTCAAAAAGAGGTAGAAGCGTTAATTGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCTCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATCTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAACTTAGGCGTTAGCCTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAATGAAGCAAGTTCAGGTCACCAAGGTGGTTCTTCAACGAATGCAAAT
ACACCGACACTGGATAGCTTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTCTAGATCCTGTTATCGGTCGTGG
TAAAGAAATTCAACGTGTAATTGAAGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGAGAACCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATTGTAAATAATGAAGTTCCTGAAACATTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTTGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTAAAGAAAGTTATGGA
TGAAATCCGTCAAGCTGGAAACATTATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATTGATGCATCGAACATTTTAAAACCATCTTTAGCACGCGGAGAGTTACAATGTATCGGGGCGACAACCTTAGATGAA
TATCGTAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTCCAACCAATTCACGTTGATGAGCCAAGTTTAGACGA
ATCAACTCAAATCTTGAAAGGTTTACGTGATCGTTACGAAGCGCATCACCGTGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGACCGCTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTACAACTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTGCAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAAAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTC
GTTTCTACGTGGACTCGTATACCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCACAACCGTGTTATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCGAAAGCTGTTCGTCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAACTAGCAAGAGCATTAGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCGACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAGGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACGGATTCTAAAGGGCGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGATGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTGAATCAGTTAGTGAAGCGCTTAAAAGAGCAAGAGATTGAATTGCATTTAACAGAAGG
AGCGATTTCAGCCATTGCTGATAAAGGATTTGACCGAGAATATGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGGGAA
TCATTTGTCATTCATAGCGCTGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACACATTTTACTTGGGCTTGTACGCGAAGGGGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GGTTAAGTCCAGAGAAGGTTCAAAAAGAGGTAGAAGCGTTAATTGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCTCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATCTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAACTTAGGCGTTAGCCTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAATGAAGCAAGTTCAGGTCACCAAGGTGGTTCTTCAACGAATGCAAAT
ACACCGACACTGGATAGCTTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTCTAGATCCTGTTATCGGTCGTGG
TAAAGAAATTCAACGTGTAATTGAAGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGAGAACCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATTGTAAATAATGAAGTTCCTGAAACATTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTTGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTAAAGAAAGTTATGGA
TGAAATCCGTCAAGCTGGAAACATTATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATTGATGCATCGAACATTTTAAAACCATCTTTAGCACGCGGAGAGTTACAATGTATCGGGGCGACAACCTTAGATGAA
TATCGTAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTCCAACCAATTCACGTTGATGAGCCAAGTTTAGACGA
ATCAACTCAAATCTTGAAAGGTTTACGTGATCGTTACGAAGCGCATCACCGTGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGACCGCTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTACAACTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTGCAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAAAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTC
GTTTCTACGTGGACTCGTATACCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCACAACCGTGTTATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCGAAAGCTGTTCGTCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAACTAGCAAGAGCATTAGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCGACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAGGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACGGATTCTAAAGGGCGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGATGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTGAATCAGTTAGTGAAGCGCTTAAAAGAGCAAGAGATTGAATTGCATTTAACAGAAGG
AGCGATTTCAGCCATTGCTGATAAAGGATTTGACCGAGAATATGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGGGAA
TCATTTGTCATTCATAGCGCTGAAAAGGTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.926 |
99.877 |
0.858 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.625 |
98.644 |
0.499 |
| clpC | Streptococcus thermophilus LMD-9 |
45.718 |
100 |
0.467 |
| clpC | Streptococcus mutans UA159 |
44.881 |
100 |
0.465 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.476 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.644 |
0.457 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.859 |
79.778 |
0.422 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.859 |
79.778 |
0.422 |
| clpE | Streptococcus pneumoniae Rx1 |
52.859 |
79.778 |
0.422 |
| clpE | Streptococcus pneumoniae D39 |
52.859 |
79.778 |
0.422 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.893 |
78.175 |
0.406 |