Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | GII88_RS18950 | Genome accession | NZ_CP045814 |
| Coordinates | 3610363..3610647 (-) | Length | 94 a.a. |
| NCBI ID | WP_003185421.1 | Uniprot ID | Q65EP9 |
| Organism | Bacillus licheniformis strain P8_B2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
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Genomic Context
Location: 3605363..3615647
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII88_RS18930 (GII88_18930) | smpB | 3606173..3606646 (-) | 474 | WP_009329604.1 | SsrA-binding protein SmpB | - |
| GII88_RS18935 (GII88_18935) | rnr | 3606758..3609061 (-) | 2304 | WP_003185414.1 | ribonuclease R | - |
| GII88_RS18940 (GII88_18940) | - | 3609075..3609821 (-) | 747 | WP_003185416.1 | carboxylesterase | - |
| GII88_RS18945 (GII88_18945) | secG | 3609962..3610192 (-) | 231 | WP_003185418.1 | preprotein translocase subunit SecG | - |
| GII88_RS18950 (GII88_18950) | abrB | 3610363..3610647 (-) | 285 | WP_003185421.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| GII88_RS18955 (GII88_18955) | - | 3610676..3610909 (-) | 234 | WP_085959538.1 | helix-turn-helix transcriptional regulator | - |
| GII88_RS18960 (GII88_18960) | - | 3611062..3611463 (+) | 402 | WP_026080846.1 | transcriptional regulator | - |
| GII88_RS18965 (GII88_18965) | - | 3611633..3612031 (+) | 399 | WP_009329610.1 | helix-turn-helix transcriptional regulator | - |
| GII88_RS18970 (GII88_18970) | - | 3612079..3612756 (-) | 678 | WP_003185432.1 | ABC transporter permease | - |
| GII88_RS18975 (GII88_18975) | opuCC | 3612773..3613690 (-) | 918 | WP_009329611.1 | osmoprotectant ABC transporter substrate-binding lipoprotein OpuCC | - |
| GII88_RS18980 (GII88_18980) | - | 3613704..3614357 (-) | 654 | WP_009329612.1 | ABC transporter permease | - |
| GII88_RS18985 (GII88_18985) | - | 3614379..3615518 (-) | 1140 | WP_003185439.1 | betaine/proline/choline family ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10486.36 Da Isoelectric Point: 7.9620
>NTDB_id=346560 GII88_RS18950 WP_003185421.1 3610363..3610647(-) (abrB) [Bacillus licheniformis strain P8_B2]
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK
Nucleotide
Download Length: 285 bp
>NTDB_id=346560 GII88_RS18950 WP_003185421.1 3610363..3610647(-) (abrB) [Bacillus licheniformis strain P8_B2]
GTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTCTCCCGGTCGAAATGCGCAGGGTGCTGAA
TATCAATGAAAAGGACCCGCTCGAAATATATACCGACGGCGAAAACATCATTTTGACAAAATACGCCGCAAACATGGCAT
GTTTGATGACCGGCGACATCACCACGAAAAATAAAACGTATGCGGGCGGCAAAATCGTACTCAGCCCGCGCGGAGCGGAA
ATGCTCCTGGAAGATATGATGGCGGCACTGTCAGAAAAGAAATAA
GTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTCTCCCGGTCGAAATGCGCAGGGTGCTGAA
TATCAATGAAAAGGACCCGCTCGAAATATATACCGACGGCGAAAACATCATTTTGACAAAATACGCCGCAAACATGGCAT
GTTTGATGACCGGCGACATCACCACGAAAAATAAAACGTATGCGGGCGGCAAAATCGTACTCAGCCCGCGCGGAGCGGAA
ATGCTCCTGGAAGATATGATGGCGGCACTGTCAGAAAAGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.044 |
96.809 |
0.543 |