Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | SSUBM407_RS00400 | Genome accession | NC_012926 |
| Coordinates | 71450..71716 (+) | Length | 88 a.a. |
| NCBI ID | WP_014635810.1 | Uniprot ID | A0A2K1SXG9 |
| Organism | Streptococcus suis BM407 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 66450..76716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSUBM407_RS00365 (SSUBM407_0057) | cinA | 66456..67637 (+) | 1182 | WP_012774894.1 | competence/damage-inducible protein A | Machinery gene |
| SSUBM407_RS00370 (SSUBM407_0058) | recA | 67689..68840 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| SSUBM407_RS00375 (SSUBM407_0059) | spx | 69076..69474 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| SSUBM407_RS00380 (SSUBM407_0060) | - | 69574..69840 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| SSUBM407_RS00385 (SSUBM407_0061) | ruvX | 69840..70259 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| SSUBM407_RS00390 (SSUBM407_0062) | - | 70271..70591 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| SSUBM407_RS00395 (SSUBM407_0063) | - | 70799..71377 (+) | 579 | WP_012774895.1 | nucleotidyltransferase family protein | - |
| SSUBM407_RS00400 (SSUBM407_0064) | comX/sigX | 71450..71716 (+) | 267 | WP_014635810.1 | hypothetical protein | Regulator |
| SSUBM407_RS00405 (SSUBM407_0065) | rpsJ | 72039..72347 (+) | 309 | WP_011922546.1 | 30S ribosomal protein S10 | - |
| SSUBM407_RS00410 (SSUBM407_0066) | rplC | 72444..73070 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| SSUBM407_RS00415 (SSUBM407_0067) | rplD | 73095..73718 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| SSUBM407_RS00420 (SSUBM407_0068) | - | 73718..74017 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| SSUBM407_RS00425 (SSUBM407_0069) | rplB | 74035..74868 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| SSUBM407_RS00430 (SSUBM407_0070) | rpsS | 75119..75400 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| SSUBM407_RS00435 (SSUBM407_0071) | rplV | 75418..75762 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| SSUBM407_RS00440 (SSUBM407_0072) | rpsC | 75775..76428 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10670.50 Da Isoelectric Point: 9.1949
>NTDB_id=34644 SSUBM407_RS00400 WP_014635810.1 71450..71716(+) (comX/sigX) [Streptococcus suis BM407]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=34644 SSUBM407_RS00400 WP_014635810.1 71450..71716(+) (comX/sigX) [Streptococcus suis BM407]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis isolate S10 |
71.233 |
82.955 |
0.591 |
| comX/sigX | Streptococcus suis P1/7 |
71.233 |
82.955 |
0.591 |