Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EXW44_RS26300 | Genome accession | NZ_CP036057 |
| Coordinates | 5130843..5131127 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain JAS06/1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5125843..5136127
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW44_RS26265 (EXW44_26605) | tmk | 5125997..5126623 (+) | 627 | WP_002130202.1 | dTMP kinase | - |
| EXW44_RS26270 (EXW44_26610) | holB | 5126659..5127642 (+) | 984 | WP_215563870.1 | DNA polymerase III subunit delta' | - |
| EXW44_RS26275 (EXW44_26615) | - | 5127648..5128475 (+) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| EXW44_RS26280 (EXW44_26620) | yabA | 5128490..5128840 (+) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| EXW44_RS26285 (EXW44_26625) | - | 5128961..5129701 (+) | 741 | WP_002130206.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EXW44_RS26290 (EXW44_26630) | - | 5129688..5129978 (+) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| EXW44_RS26295 (EXW44_26635) | rsmI | 5129947..5130822 (+) | 876 | WP_002130208.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EXW44_RS26300 (EXW44_26640) | abrB | 5130843..5131127 (-) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| EXW44_RS26305 (EXW44_26645) | metG | 5131648..5133630 (+) | 1983 | WP_002029324.1 | methionine--tRNA ligase | - |
| EXW44_RS26310 (EXW44_26650) | - | 5133796..5134563 (+) | 768 | WP_098633223.1 | TatD family hydrolase | - |
| EXW44_RS26315 (EXW44_26655) | rnmV | 5134824..5135381 (+) | 558 | WP_002029323.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=346357 EXW44_RS26300 WP_000843037.1 5130843..5131127(-) (abrB) [Bacillus mycoides strain JAS06/1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=346357 EXW44_RS26300 WP_000843037.1 5130843..5131127(-) (abrB) [Bacillus mycoides strain JAS06/1]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAATGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAATGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |