Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EXW44_RS26605 | Genome accession | NZ_CP036057 |
| Coordinates | 5185527..5187962 (+) | Length | 811 a.a. |
| NCBI ID | WP_002063405.1 | Uniprot ID | - |
| Organism | Bacillus mycoides strain JAS06/1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5180527..5192962
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW44_RS26590 (EXW44_26930) | ctsR | 5183256..5183717 (+) | 462 | WP_002029353.1 | transcriptional regulator CtsR | - |
| EXW44_RS26595 (EXW44_26935) | - | 5183887..5184435 (+) | 549 | WP_002169333.1 | UvrB/UvrC motif-containing protein | - |
| EXW44_RS26600 (EXW44_26940) | - | 5184440..5185504 (+) | 1065 | WP_002169332.1 | protein arginine kinase | - |
| EXW44_RS26605 (EXW44_26945) | clpC | 5185527..5187962 (+) | 2436 | WP_002063405.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| EXW44_RS26610 (EXW44_26950) | radA | 5188057..5189433 (+) | 1377 | WP_199627579.1 | DNA repair protein RadA | Machinery gene |
| EXW44_RS26615 (EXW44_26955) | disA | 5189437..5190510 (+) | 1074 | WP_000392162.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| EXW44_RS26620 (EXW44_26960) | - | 5190671..5191774 (+) | 1104 | WP_002063406.1 | PIN/TRAM domain-containing protein | - |
| EXW44_RS26625 (EXW44_26965) | ispD | 5191791..5192471 (+) | 681 | WP_215563876.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90613.47 Da Isoelectric Point: 6.4056
>NTDB_id=346358 EXW44_RS26605 WP_002063405.1 5185527..5187962(+) (clpC) [Bacillus mycoides strain JAS06/1]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEKQGQENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDIEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEKQGQENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDIEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=346358 EXW44_RS26605 WP_002063405.1 5185527..5187962(+) (clpC) [Bacillus mycoides strain JAS06/1]
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGACGTGGAACGGAAGCTTCTCAAACAGTACATTAC
ACACCTCGTGCTAAAAAAGTTATTGAGTTGTCTATGGACGAAGCTCGTAAGCTAGGCCATTCCTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGCGTTTTAAATAATTTAGGTGTAAGCCTAAATAAAG
CAAGACAACAAGTGTTACAACTCCTTGGAAGTAATGAAGCTAGTTCAGGTCACCAGGGTGGTTCATCAACAAATGCGAAT
ACACCTACACTTGACAGTCTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTATTAATTGGAGAACCTGGTGTAG
GTAAGACAGCAATTGCGGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGTACAGTTGTTGCTGGAACAAAATATCGTGGTGAATTTGAGGATCGTTTAAAGAAAGTGATGGA
TGAGATTCGCCAAGCTGGTAACATCATTCTATTTATTGATGAGCTTCATACGTTAATTGGTGCAGGAGGGGCGGAAGGTG
CAATTGATGCATCGAATATTTTAAAACCATCTTTAGCACGTGGTGAATTACAATGTATTGGTGCAACAACTTTAGACGAA
TATCGTAAATATATTGAAAAGGATGCGGCATTAGAAAGACGTTTCCAACCAATTCATGTTGATGAACCAAACTTAGAAGA
ATCAGTTCAGATTTTAAAAGGTTTACGTGACCGTTATGAGGCGCATCACCGCGTATCTATTACAGATGATGCAATCGATG
CGGCTGTAAAACTTTCAGATCGTTACATTACAGACCGTTTTTTACCTGATAAAGCAATCGATTTAATTGATGAGGCTGCA
TCAAAAGTGCGCTTACGTTCTTATACAACACCGCCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGCCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTGCGTGAAAAGT
TAGAAGATACAAAGCGTCAGTGGAAAGAGAAACAAGGACAAGAAAACTCAGAAGTAACAGTAGAAGATATTGCAAATGTC
GTTTCCACATGGACGCGTATTCCAGTTTCTAAACTTGCACAAACAGAGACAGATAAATTATTAAACTTGGAATCAATTTT
ACATGATCGTTTAATTGGGCAGGATGAAGCAGTTGTAGCTGTGGCAAAAGCTGTTCGTCGTGCGAGAGCGGGATTAAAAG
ATCCGAAACGTCCAATTGGCTCATTTATTTTCCTAGGACCTACTGGTGTAGGTAAAACAGAACTAGCAAGGGCATTAGCG
GAATCTATGTTCGGTGATGAGGATGCAATGATCCGCATCGATATGTCTGAGTACATGGAAAAGCATTCTACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGTAAGCCATATTCAG
TTGTCTTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGCCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAATGTTGGTGCAGACGCATTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAT
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAACTCTTATGGTGAATCAGTTAGTGAATCGCTTAAAAGAACAAGAGATTGAATTGCATTTAACAGAAGG
AGCAATTTCAGCAATTGCTGATAAAGGATTTGATCGAGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAAAAACATG
TAGAAGATAGACTATCAGAAGAACTGTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATATAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGACGTGGAACGGAAGCTTCTCAAACAGTACATTAC
ACACCTCGTGCTAAAAAAGTTATTGAGTTGTCTATGGACGAAGCTCGTAAGCTAGGCCATTCCTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGCGTTTTAAATAATTTAGGTGTAAGCCTAAATAAAG
CAAGACAACAAGTGTTACAACTCCTTGGAAGTAATGAAGCTAGTTCAGGTCACCAGGGTGGTTCATCAACAAATGCGAAT
ACACCTACACTTGACAGTCTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTATTAATTGGAGAACCTGGTGTAG
GTAAGACAGCAATTGCGGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGTACAGTTGTTGCTGGAACAAAATATCGTGGTGAATTTGAGGATCGTTTAAAGAAAGTGATGGA
TGAGATTCGCCAAGCTGGTAACATCATTCTATTTATTGATGAGCTTCATACGTTAATTGGTGCAGGAGGGGCGGAAGGTG
CAATTGATGCATCGAATATTTTAAAACCATCTTTAGCACGTGGTGAATTACAATGTATTGGTGCAACAACTTTAGACGAA
TATCGTAAATATATTGAAAAGGATGCGGCATTAGAAAGACGTTTCCAACCAATTCATGTTGATGAACCAAACTTAGAAGA
ATCAGTTCAGATTTTAAAAGGTTTACGTGACCGTTATGAGGCGCATCACCGCGTATCTATTACAGATGATGCAATCGATG
CGGCTGTAAAACTTTCAGATCGTTACATTACAGACCGTTTTTTACCTGATAAAGCAATCGATTTAATTGATGAGGCTGCA
TCAAAAGTGCGCTTACGTTCTTATACAACACCGCCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGCCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTGCGTGAAAAGT
TAGAAGATACAAAGCGTCAGTGGAAAGAGAAACAAGGACAAGAAAACTCAGAAGTAACAGTAGAAGATATTGCAAATGTC
GTTTCCACATGGACGCGTATTCCAGTTTCTAAACTTGCACAAACAGAGACAGATAAATTATTAAACTTGGAATCAATTTT
ACATGATCGTTTAATTGGGCAGGATGAAGCAGTTGTAGCTGTGGCAAAAGCTGTTCGTCGTGCGAGAGCGGGATTAAAAG
ATCCGAAACGTCCAATTGGCTCATTTATTTTCCTAGGACCTACTGGTGTAGGTAAAACAGAACTAGCAAGGGCATTAGCG
GAATCTATGTTCGGTGATGAGGATGCAATGATCCGCATCGATATGTCTGAGTACATGGAAAAGCATTCTACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGTAAGCCATATTCAG
TTGTCTTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGCCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAATGTTGGTGCAGACGCATTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAT
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAACTCTTATGGTGAATCAGTTAGTGAATCGCTTAAAAGAACAAGAGATTGAATTGCATTTAACAGAAGG
AGCAATTTCAGCAATTGCTGATAAAGGATTTGATCGAGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAAAAACATG
TAGAAGATAGACTATCAGAAGAACTGTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATATAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.802 |
99.877 |
0.857 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.125 |
98.644 |
0.494 |
| clpC | Streptococcus thermophilus LMD-9 |
45.728 |
100 |
0.469 |
| clpC | Streptococcus mutans UA159 |
44.762 |
100 |
0.464 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.235 |
100 |
0.462 |
| clpC | Streptococcus pneumoniae D39 |
46.424 |
98.274 |
0.456 |
| clpC | Streptococcus pneumoniae Rx1 |
46.424 |
98.274 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.125 |
98.644 |
0.455 |
| clpE | Streptococcus mutans UA159 |
53.231 |
80.148 |
0.427 |
| clpE | Streptococcus pneumoniae R6 |
52.087 |
79.778 |
0.416 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.087 |
79.778 |
0.416 |
| clpE | Streptococcus pneumoniae Rx1 |
52.087 |
79.778 |
0.416 |
| clpE | Streptococcus pneumoniae D39 |
52.087 |
79.778 |
0.416 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.42 |
78.175 |
0.402 |