Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EXW51_RS20850 Genome accession   NZ_CP036043
Coordinates   4013660..4014454 (-) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus mycoides strain BPN58/4     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4008660..4019454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW51_RS20810 (EXW51_21235) - 4009829..4010062 (+) 234 WP_001190193.1 DUF2627 domain-containing protein -
  EXW51_RS20815 (EXW51_21240) - 4010114..4010842 (-) 729 WP_002067064.1 glycerophosphodiester phosphodiesterase -
  EXW51_RS20820 (EXW51_21245) - 4010893..4011039 (+) 147 WP_001247671.1 YycC family protein -
  EXW51_RS20825 (EXW51_21250) - 4011280..4011843 (-) 564 WP_002167694.1 PRK06770 family protein -
  EXW51_RS30230 - 4012141..4012239 (-) 99 Protein_4018 sporulation initiation factor Spo0A C-terminal domain-containing protein -
  EXW51_RS20835 (EXW51_21260) - 4012478..4012753 (-) 276 WP_002067062.1 hypothetical protein -
  EXW51_RS20840 (EXW51_21265) - 4012794..4013264 (-) 471 WP_215575181.1 hypothetical protein -
  EXW51_RS20845 (EXW51_21270) - 4013287..4013493 (-) 207 WP_215573849.1 site-specific integrase -
  EXW51_RS20850 (EXW51_21275) spo0A 4013660..4014454 (-) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  EXW51_RS20855 (EXW51_21285) spoIVB 4014741..4016033 (-) 1293 WP_002015079.1 SpoIVB peptidase -
  EXW51_RS20860 (EXW51_21290) recN 4016153..4017892 (-) 1740 WP_215573850.1 DNA repair protein RecN Machinery gene
  EXW51_RS20865 (EXW51_21295) argR 4018163..4018612 (-) 450 WP_002015076.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=346190 EXW51_RS20850 WP_002015081.1 4013660..4014454(-) (spo0A) [Bacillus mycoides strain BPN58/4]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=346190 EXW51_RS20850 WP_002015081.1 4013660..4014454(-) (spo0A) [Bacillus mycoides strain BPN58/4]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAAAAGCAGCCTGATATACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTCTGGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATCGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment