Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW62_RS05725 Genome accession   NZ_CP036034
Coordinates   1116247..1116930 (+) Length   227 a.a.
NCBI ID   WP_215555573.1    Uniprot ID   -
Organism   Bacillus mycoides strain BPN57/2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1111247..1121930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW62_RS05705 (EXW62_05840) - 1112229..1113875 (+) 1647 WP_215555571.1 peptide ABC transporter substrate-binding protein -
  EXW62_RS05710 (EXW62_05845) - 1113906..1114109 (-) 204 WP_000559981.1 hypothetical protein -
  EXW62_RS05715 (EXW62_05855) spx 1114689..1115084 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  EXW62_RS05720 (EXW62_05860) - 1115135..1115809 (-) 675 WP_215555572.1 TerC family protein -
  EXW62_RS05725 (EXW62_05865) mecA 1116247..1116930 (+) 684 WP_215555573.1 adaptor protein MecA Regulator
  EXW62_RS05730 (EXW62_05870) - 1117003..1118547 (+) 1545 WP_215555574.1 cardiolipin synthase -
  EXW62_RS05735 (EXW62_05875) - 1118638..1119873 (+) 1236 WP_215556569.1 competence protein CoiA family protein -
  EXW62_RS05740 (EXW62_05880) pepF 1119924..1121750 (+) 1827 WP_215555575.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26960.06 Da        Isoelectric Point: 4.0116

>NTDB_id=346073 EXW62_RS05725 WP_215555573.1 1116247..1116930(+) (mecA) [Bacillus mycoides strain BPN57/2]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFADGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTSFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=346073 EXW62_RS05725 WP_215555573.1 1116247..1116930(+) (mecA) [Bacillus mycoides strain BPN57/2]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAACCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTGCCGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAGGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTGGATAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAGCTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTGCAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTTGATGAAGTGCTACATGATGAAGAAGAGATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546


Multiple sequence alignment