Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EXW62_RS00525 | Genome accession | NZ_CP036034 |
| Coordinates | 95049..97484 (+) | Length | 811 a.a. |
| NCBI ID | WP_215554956.1 | Uniprot ID | - |
| Organism | Bacillus mycoides strain BPN57/2 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 90049..102484
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW62_RS00510 (EXW62_00510) | ctsR | 92778..93239 (+) | 462 | WP_002029353.1 | transcriptional regulator CtsR | - |
| EXW62_RS00515 (EXW62_00515) | - | 93409..93957 (+) | 549 | WP_002159618.1 | UvrB/UvrC motif-containing protein | - |
| EXW62_RS00520 (EXW62_00520) | - | 93962..95026 (+) | 1065 | WP_215554955.1 | protein arginine kinase | - |
| EXW62_RS00525 (EXW62_00525) | clpC | 95049..97484 (+) | 2436 | WP_215554956.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| EXW62_RS00530 (EXW62_00530) | radA | 97579..98955 (+) | 1377 | WP_002159617.1 | DNA repair protein RadA | Machinery gene |
| EXW62_RS00535 (EXW62_00535) | disA | 98959..100032 (+) | 1074 | WP_000392162.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| EXW62_RS00540 (EXW62_00540) | - | 100196..101299 (+) | 1104 | WP_016103294.1 | PIN/TRAM domain-containing protein | - |
| EXW62_RS00545 (EXW62_00545) | ispD | 101316..101996 (+) | 681 | WP_215554957.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90583.44 Da Isoelectric Point: 6.4056
>NTDB_id=346060 EXW62_RS00525 WP_215554956.1 95049..97484(+) (clpC) [Bacillus mycoides strain BPN57/2]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEKQGQENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDIEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPNLEESVQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEKQGQENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDIEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=346060 EXW62_RS00525 WP_215554956.1 95049..97484(+) (clpC) [Bacillus mycoides strain BPN57/2]
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGACGTGGAACGGAAGCTTCTCAAACAGTACATTAC
ACACCTCGTGCTAAAAAAGTTATTGAGTTGTCTATGGACGAAGCTCGTAAATTGGGCCATTCCTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAATTTAGGTGTAAGCCTAAACAAAG
CAAGACAACAAGTGTTACAACTCCTTGGAAGTAATGAAGCTAGTTCAGGTCACCAAGGTGGTTCATCAACAAATGCGAAT
ACACCTACACTTGACAGTCTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGATCCTGTTATTGGACGTGG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTATTAATTGGAGAACCTGGTGTAG
GTAAGACAGCAATTGCGGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGTACAGTTGTTGCTGGAACAAAATATCGTGGTGAATTTGAGGATCGTTTAAAGAAAGTGATGGA
TGAGATTCGCCAAGCTGGTAACATCATTCTATTTATTGATGAGCTTCATACATTAATTGGTGCAGGAGGGGCAGAAGGTG
CAATTGATGCATCGAATATTTTAAAACCATCTTTAGCACGTGGTGAATTACAATGTATTGGTGCAACAACTTTAGACGAA
TATCGTAAATATATTGAAAAGGATGCGGCATTAGAAAGACGTTTCCAACCAATTCATGTTGATGAACCAAACTTAGAAGA
ATCAGTTCAAATTTTAAAAGGTTTACGTGACCGTTATGAGGCGCATCACCGCGTATCTATTACAGATGATGCAATCGATG
CGGCTGTAAAACTTTCAGATCGTTACATTACAGACCGTTTTTTACCTGATAAAGCAATCGATTTAATTGATGAGGCTGCA
TCAAAAGTACGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCGGCTGTACAAAGCCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTACGTGAAAAGT
TAGAAGATACAAAGCGTCAGTGGAAAGAGAAACAAGGACAAGAAAACTCAGAAGTAACAGTAGAAGATATTGCAAATGTC
GTTTCCACATGGACACGTATTCCAGTTTCTAAACTTGCACAAACAGAGACAGATAAATTATTAAACTTGGAATCAATTTT
ACATGATCGTTTAATTGGGCAGGATGAAGCAGTTGTAGCTGTGGCAAAAGCTGTTCGTCGTGCGAGAGCGGGATTAAAAG
ATCCGAAACGTCCAATTGGCTCATTTATTTTCCTAGGACCGACTGGTGTAGGTAAAACAGAACTAGCGAGGGCGTTAGCG
GAATCTATGTTCGGTGATGAGGATGCAATGATCCGCATTGATATGTCTGAGTACATGGAAAAGCATTCTACCTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGTAAGCCATATTCAG
TTGTCTTATTAGATGAAGTAGAGAAAGCTCATCCTGACGTGTTTAATATTTTACTACAAGTATTAGAAGATGGCCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAATGTTGGTGCAGACGCATTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAT
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAACTCTTATGGTGAATCAGTTAGTGAATCGCTTAAAAGAACAAGAGATTGAATTGCACTTAACAGAAGG
AGCAATTTCAGCAATTGCTGATAAAGGATTTGATCGAGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAAAAACATG
TAGAAGATAGACTATCAGAAGAACTGTTAAAAGGTGCTATTGAGAAAGGGCAAAAAGTTATCTTTGATATAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAACGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTAAGTCCAGAGAAAGTTCAAAAAGAGGTAGAAGCATTAATTGGACGTGGAACGGAAGCTTCTCAAACAGTACATTAC
ACACCTCGTGCTAAAAAAGTTATTGAGTTGTCTATGGACGAAGCTCGTAAATTGGGCCATTCCTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAATTTAGGTGTAAGCCTAAACAAAG
CAAGACAACAAGTGTTACAACTCCTTGGAAGTAATGAAGCTAGTTCAGGTCACCAAGGTGGTTCATCAACAAATGCGAAT
ACACCTACACTTGACAGTCTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGATCCTGTTATTGGACGTGG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTATTAATTGGAGAACCTGGTGTAG
GTAAGACAGCAATTGCGGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACATTAGATATGGGTACAGTTGTTGCTGGAACAAAATATCGTGGTGAATTTGAGGATCGTTTAAAGAAAGTGATGGA
TGAGATTCGCCAAGCTGGTAACATCATTCTATTTATTGATGAGCTTCATACATTAATTGGTGCAGGAGGGGCAGAAGGTG
CAATTGATGCATCGAATATTTTAAAACCATCTTTAGCACGTGGTGAATTACAATGTATTGGTGCAACAACTTTAGACGAA
TATCGTAAATATATTGAAAAGGATGCGGCATTAGAAAGACGTTTCCAACCAATTCATGTTGATGAACCAAACTTAGAAGA
ATCAGTTCAAATTTTAAAAGGTTTACGTGACCGTTATGAGGCGCATCACCGCGTATCTATTACAGATGATGCAATCGATG
CGGCTGTAAAACTTTCAGATCGTTACATTACAGACCGTTTTTTACCTGATAAAGCAATCGATTTAATTGATGAGGCTGCA
TCAAAAGTACGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCGGCTGTACAAAGCCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTACGTGAAAAGT
TAGAAGATACAAAGCGTCAGTGGAAAGAGAAACAAGGACAAGAAAACTCAGAAGTAACAGTAGAAGATATTGCAAATGTC
GTTTCCACATGGACACGTATTCCAGTTTCTAAACTTGCACAAACAGAGACAGATAAATTATTAAACTTGGAATCAATTTT
ACATGATCGTTTAATTGGGCAGGATGAAGCAGTTGTAGCTGTGGCAAAAGCTGTTCGTCGTGCGAGAGCGGGATTAAAAG
ATCCGAAACGTCCAATTGGCTCATTTATTTTCCTAGGACCGACTGGTGTAGGTAAAACAGAACTAGCGAGGGCGTTAGCG
GAATCTATGTTCGGTGATGAGGATGCAATGATCCGCATTGATATGTCTGAGTACATGGAAAAGCATTCTACCTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGTAAGCCATATTCAG
TTGTCTTATTAGATGAAGTAGAGAAAGCTCATCCTGACGTGTTTAATATTTTACTACAAGTATTAGAAGATGGCCGTTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACGTCTAATGTTGGTGCAGACGCATTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAT
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTAACTCTTATGGTGAATCAGTTAGTGAATCGCTTAAAAGAACAAGAGATTGAATTGCACTTAACAGAAGG
AGCAATTTCAGCAATTGCTGATAAAGGATTTGATCGAGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAAAAACATG
TAGAAGATAGACTATCAGAAGAACTGTTAAAAGGTGCTATTGAGAAAGGGCAAAAAGTTATCTTTGATATAGAAGGAGAA
TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.679 |
99.877 |
0.856 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.125 |
98.644 |
0.494 |
| clpC | Streptococcus thermophilus LMD-9 |
45.728 |
100 |
0.469 |
| clpC | Streptococcus mutans UA159 |
44.762 |
100 |
0.464 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.235 |
100 |
0.462 |
| clpC | Streptococcus pneumoniae D39 |
46.424 |
98.274 |
0.456 |
| clpC | Streptococcus pneumoniae Rx1 |
46.424 |
98.274 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.125 |
98.644 |
0.455 |
| clpE | Streptococcus mutans UA159 |
53.231 |
80.148 |
0.427 |
| clpE | Streptococcus pneumoniae R6 |
52.087 |
79.778 |
0.416 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.087 |
79.778 |
0.416 |
| clpE | Streptococcus pneumoniae Rx1 |
52.087 |
79.778 |
0.416 |
| clpE | Streptococcus pneumoniae D39 |
52.087 |
79.778 |
0.416 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.42 |
78.175 |
0.402 |