Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW38_RS06310 Genome accession   NZ_CP036026
Coordinates   1201755..1202438 (+) Length   227 a.a.
NCBI ID   WP_002158885.1    Uniprot ID   J8FGN2
Organism   Bacillus mycoides strain BPN54/2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1196755..1207438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW38_RS06290 (EXW38_06390) - 1197737..1199383 (+) 1647 WP_215572537.1 peptide ABC transporter substrate-binding protein -
  EXW38_RS06295 (EXW38_06395) - 1199414..1199617 (-) 204 WP_131229703.1 hypothetical protein -
  EXW38_RS06300 (EXW38_06405) spx 1200197..1200592 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  EXW38_RS06305 (EXW38_06410) - 1200643..1201317 (-) 675 WP_131229705.1 TerC family protein -
  EXW38_RS06310 (EXW38_06415) mecA 1201755..1202438 (+) 684 WP_002158885.1 adaptor protein MecA Regulator
  EXW38_RS06315 (EXW38_06420) - 1202511..1204055 (+) 1545 WP_131229706.1 cardiolipin synthase -
  EXW38_RS06320 (EXW38_06425) - 1204146..1205381 (+) 1236 WP_215572926.1 competence protein CoiA -
  EXW38_RS06325 (EXW38_06430) pepF 1205432..1207258 (+) 1827 WP_215572538.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26988.12 Da        Isoelectric Point: 4.0116

>NTDB_id=346024 EXW38_RS06310 WP_002158885.1 1201755..1202438(+) (mecA) [Bacillus mycoides strain BPN54/2]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFVDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTSFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=346024 EXW38_RS06310 WP_002158885.1 1201755..1202438(+) (mecA) [Bacillus mycoides strain BPN54/2]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAACCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTGTCGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAGGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTGGATAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAGCTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTGCAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTTGATGAAGTGCTACATGATGAAGAAGAGATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB J8FGN2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.825

100

0.551


Multiple sequence alignment