Detailed information NTG0034599

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SSU_RS00805
• Genome accession: NC_012925
• Coordinates: 122741..123175 (+)
• Length: 144 a.a.
• NCBI ID: WP_011922561.1
• Uniprot ID: -
• Organism: Streptococcus suis P1/7
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117741..128175

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU_RS00770 (SSU0124)	-	118490..118855 (+)	366	WP_002936568.1	DUF1033 family protein	-
SSU_RS00775 (SSU0125)	-	118890..119833 (-)	944	Protein_115	S66 family peptidase	-
SSU_RS00780 (SSU0126)	comYA	119919..120869 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
SSU_RS00785 (SSU0127)	comYB	120781..121818 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
SSU_RS00790 (SSU0128)	comYC	121820..122101 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
SSU_RS00795 (SSU0129)	comGD	122082..122489 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
SSU_RS00800 (SSU0130)	comYE	122461..122754 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
SSU_RS00805 (SSU0131)	comGF/cglF	122741..123175 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
SSU_RS00810 (SSU0132)	comGG	123153..123563 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
SSU_RS00815 (SSU0133)	comYH	123620..124573 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
SSU_RS00820 (SSU0134)	-	124623..125810 (+)	1188	WP_012775422.1	acetate kinase	-
SSU_RS00825 (SSU0135)	-	126125..126676 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
SSU_RS00830 (SSU0136)	-	126732..127988 (+)	1257	WP_011921729.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16491.85 Da
• Isoelectric Point: 5.9234

>NTDB_id=34599 SSU_RS00805 WP_011922561.1 122741..123175(+) (comGF/cglF) [Streptococcus suis P1/7]
MLKSKIPAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=34599 SSU_RS00805 WP_011922561.1 122741..123175(+) (comGF/cglF) [Streptococcus suis P1/7]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444