Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW49_RS06395 | Genome accession | NZ_CP036023 |
| Coordinates | 1260892..1261215 (-) | Length | 107 a.a. |
| NCBI ID | WP_002030429.1 | Uniprot ID | A0A084J505 |
| Organism | Bacillus mycoides strain BPN52/2 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1255892..1266215
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW49_RS06365 (EXW49_06495) | sipW | 1256249..1256818 (+) | 570 | WP_002064334.1 | signal peptidase I SipW | - |
| EXW49_RS06370 (EXW49_06500) | - | 1256885..1257472 (+) | 588 | WP_000172837.1 | CalY family protein | - |
| EXW49_RS06375 (EXW49_06505) | - | 1257544..1258425 (-) | 882 | WP_002140633.1 | IS3 family transposase | - |
| EXW49_RS06380 (EXW49_06510) | - | 1258434..1258730 (-) | 297 | WP_002135468.1 | transposase | - |
| EXW49_RS06385 (EXW49_06515) | - | 1258939..1259772 (+) | 834 | WP_215588844.1 | DUF4047 domain-containing protein | - |
| EXW49_RS06390 (EXW49_06520) | calY | 1260216..1260809 (+) | 594 | WP_002126106.1 | biofilm matrix protein CalY | - |
| EXW49_RS06395 (EXW49_06525) | sinR | 1260892..1261215 (-) | 324 | WP_002030429.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW49_RS06400 (EXW49_06530) | - | 1261295..1261429 (-) | 135 | WP_002011474.1 | anti-repressor SinI family protein | - |
| EXW49_RS06405 (EXW49_06535) | inhA1 | 1261772..1264159 (+) | 2388 | WP_002126109.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW49_RS06410 (EXW49_06540) | - | 1264330..1265697 (+) | 1368 | WP_002140905.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12274.04 Da Isoelectric Point: 7.2050
>NTDB_id=345976 EXW49_RS06395 WP_002030429.1 1260892..1261215(-) (sinR) [Bacillus mycoides strain BPN52/2]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTTEGHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTQWKKNQQ
Nucleotide
Download Length: 324 bp
>NTDB_id=345976 EXW49_RS06395 WP_002030429.1 1260892..1261215(-) (sinR) [Bacillus mycoides strain BPN52/2]
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
ATGATAGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGCATTTCATTAACAGAACTCGCCGAAAAAGCTGGTGTCGC
TAAATCTTACATTAGTTCTATAGAACGGAATTTACAAAAAAACCCTTCTATTCAGTTTCTTGAAAAAATTGCAGCTGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAACAACGGAGGGTCACCTAGACTCCGAATGGACACAGCTCGTT
AAAGATGCGATGAGCTCTGGTGTCTCAAAAGAACAGTTTCGTGAATTTCTCGAATTTACACAATGGAAGAAAAATCAACA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |