Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   EXW33_RS05880 Genome accession   NZ_CP036014
Coordinates   1184879..1185673 (-) Length   264 a.a.
NCBI ID   WP_000411416.1    Uniprot ID   A0A1G4L491
Organism   Bacillus toyonensis strain BPN45/4     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 1179879..1190673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW33_RS05860 (EXW33_06040) - 1179897..1180625 (-) 729 WP_000172596.1 glycerophosphodiester phosphodiesterase -
  EXW33_RS05865 (EXW33_06045) - 1180676..1180822 (+) 147 WP_001247671.1 YycC family protein -
  EXW33_RS05870 (EXW33_06050) - 1181034..1182359 (-) 1326 WP_000395075.1 glycosyltransferase -
  EXW33_RS05875 (EXW33_06055) - 1182559..1183977 (-) 1419 WP_001193753.1 membrane protein -
  EXW33_RS05880 (EXW33_06060) spo0A 1184879..1185673 (-) 795 WP_000411416.1 sporulation transcription factor Spo0A Regulator
  EXW33_RS05885 (EXW33_06070) spoIVB 1185962..1187260 (-) 1299 WP_002048975.1 SpoIVB peptidase -
  EXW33_RS05890 (EXW33_06075) recN 1187379..1189118 (-) 1740 WP_000947741.1 DNA repair protein RecN Machinery gene
  EXW33_RS05895 (EXW33_06080) argR 1189380..1189829 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29427.13 Da        Isoelectric Point: 7.1176

>NTDB_id=345862 EXW33_RS05880 WP_000411416.1 1184879..1185673(-) (spo0A) [Bacillus toyonensis strain BPN45/4]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=345862 EXW33_RS05880 WP_000411416.1 1184879..1185673(-) (spo0A) [Bacillus toyonensis strain BPN45/4]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAGCCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTAACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACCTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGTGGCAAGGCAAATGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATAGATGGAAAACCGAAAAACTTAGATGCAAGTATTACGAGTATTATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGATACATGTACTTACGAGAAGCGATTTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCGAGCCGTGTCGAGCGTGCAATCC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGAAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1G4L491

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814


Multiple sequence alignment