Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | GG844_RS09590 | Genome accession | NZ_CP045719 |
| Coordinates | 851537..852181 (+) | Length | 214 a.a. |
| NCBI ID | WP_042990618.1 | Uniprot ID | Q9ZH73 |
| Organism | Vibrio cholerae O395 substr. TCP2 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 846537..857181
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GG844_RS09580 (GG844_09580) | - | 846727..848826 (+) | 2100 | WP_001912474.1 | PTS sugar transporter subunit IIC/EAL domain-containing protein | - |
| GG844_RS09585 (GG844_09585) | - | 848798..851161 (-) | 2364 | WP_000687839.1 | DNA polymerase II | - |
| GG844_RS09590 (GG844_09590) | letA | 851537..852181 (+) | 645 | WP_042990618.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| GG844_RS09595 (GG844_09595) | uvrC | 852181..854013 (+) | 1833 | WP_000107095.1 | excinuclease ABC subunit UvrC | - |
| GG844_RS09600 (GG844_09600) | pgsA | 854061..854618 (+) | 558 | WP_001211977.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| GG844_RS09625 (GG844_09625) | - | 855511..856629 (+) | 1119 | WP_001190450.1 | GGDEF domain-containing protein | - |
| GG844_RS09630 (GG844_09630) | - | 856626..857111 (-) | 486 | WP_001261948.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23737.43 Da Isoelectric Point: 6.2340
>NTDB_id=345528 GG844_RS09590 WP_042990618.1 851537..852181(+) (letA) [Vibrio cholerae O395 substr. TCP2]
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPNTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPNTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
Nucleotide
Download Length: 645 bp
>NTDB_id=345528 GG844_RS09590 WP_042990618.1 851537..852181(+) (letA) [Vibrio cholerae O395 substr. TCP2]
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGCCGTACTAACCATGCGGATGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGTATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAGCGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAACACCGTCAACAGCTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGCCGTACTAACCATGCGGATGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGTATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAGCGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAACACCGTCAACAGCTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
51.429 |
98.131 |
0.505 |
| letA | Legionella pneumophila strain ERS1305867 |
51.429 |
98.131 |
0.505 |