Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW30_RS05885 Genome accession   NZ_CP035962
Coordinates   1141839..1142522 (+) Length   227 a.a.
NCBI ID   WP_002158885.1    Uniprot ID   J8FGN2
Organism   Bacillus mycoides strain BPN07/3     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1136839..1147522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW30_RS05865 (EXW30_05990) - 1137828..1139468 (+) 1641 WP_131229702.1 peptide ABC transporter substrate-binding protein -
  EXW30_RS05870 (EXW30_05995) - 1139498..1139701 (-) 204 WP_000559981.1 hypothetical protein -
  EXW30_RS05875 (EXW30_06005) spx 1140281..1140676 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  EXW30_RS05880 (EXW30_06010) - 1140727..1141401 (-) 675 WP_131229705.1 TerC family protein -
  EXW30_RS05885 (EXW30_06015) mecA 1141839..1142522 (+) 684 WP_002158885.1 adaptor protein MecA Regulator
  EXW30_RS05890 (EXW30_06020) - 1142595..1144139 (+) 1545 WP_002149818.1 cardiolipin synthase -
  EXW30_RS05895 (EXW30_06025) - 1144230..1145465 (+) 1236 WP_215570612.1 competence protein CoiA -
  EXW30_RS05900 (EXW30_06030) pepF 1145516..1147342 (+) 1827 WP_131229707.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26988.12 Da        Isoelectric Point: 4.0116

>NTDB_id=345310 EXW30_RS05885 WP_002158885.1 1141839..1142522(+) (mecA) [Bacillus mycoides strain BPN07/3]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFVDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTSFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=345310 EXW30_RS05885 WP_002158885.1 1141839..1142522(+) (mecA) [Bacillus mycoides strain BPN07/3]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAACCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTGTCGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAGGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTGGATAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAGCTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTGCAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTTGATGAAGTGCTACATGATGAAGAAGAGATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB J8FGN2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.825

100

0.551


Multiple sequence alignment