Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   GFM36_RS01235 Genome accession   NZ_CP045645
Coordinates   263451..264086 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain XH1056     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 258451..269086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFM36_RS01220 (GFM36_01205) - 259238..260422 (+) 1185 WP_000939107.1 S41 family peptidase -
  GFM36_RS01225 (GFM36_01210) - 260426..261847 (-) 1422 WP_000840547.1 sigma-54 dependent transcriptional regulator -
  GFM36_RS01230 (GFM36_01215) pilS 261872..263440 (-) 1569 WP_001160343.1 ATP-binding protein Regulator
  GFM36_RS01235 (GFM36_01220) letA 263451..264086 (-) 636 WP_000633799.1 response regulator Regulator
  GFM36_RS01240 (GFM36_01225) pbpG 264299..265345 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  GFM36_RS01245 (GFM36_01230) thrC 265453..266592 (-) 1140 WP_000063593.1 threonine synthase -
  GFM36_RS01250 (GFM36_01235) - 266648..267949 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  GFM36_RS01255 (GFM36_01240) - 268194..269009 (-) 816 WP_005120616.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=345283 GFM36_RS01235 WP_000633799.1 263451..264086(-) (letA) [Acinetobacter baumannii strain XH1056]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=345283 GFM36_RS01235 WP_000633799.1 263451..264086(-) (letA) [Acinetobacter baumannii strain XH1056]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAATATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55