Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EXW58_RS05825 Genome accession   NZ_CP035953
Coordinates   1142441..1143124 (+) Length   227 a.a.
NCBI ID   WP_215580912.1    Uniprot ID   -
Organism   Bacillus mycoides strain BPN03/1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1137441..1148124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW58_RS05805 (EXW58_05895) - 1138424..1140070 (+) 1647 WP_215580910.1 peptide ABC transporter substrate-binding protein -
  EXW58_RS05810 (EXW58_05900) - 1140100..1140303 (-) 204 WP_000559981.1 hypothetical protein -
  EXW58_RS05815 (EXW58_05910) spx 1140883..1141278 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  EXW58_RS05820 (EXW58_05915) - 1141329..1142003 (-) 675 WP_002158886.1 TerC family protein -
  EXW58_RS05825 (EXW58_05920) mecA 1142441..1143124 (+) 684 WP_215580912.1 adaptor protein MecA Regulator
  EXW58_RS05830 (EXW58_05925) - 1143197..1144741 (+) 1545 WP_088098799.1 cardiolipin synthase -
  EXW58_RS05835 (EXW58_05930) - 1144832..1146067 (+) 1236 WP_215582002.1 competence protein CoiA family protein -
  EXW58_RS05840 (EXW58_05935) pepF 1146118..1147944 (+) 1827 WP_215580914.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26984.13 Da        Isoelectric Point: 4.0116

>NTDB_id=345262 EXW58_RS05825 WP_215580912.1 1142441..1143124(+) (mecA) [Bacillus mycoides strain BPN03/1]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFVDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEPVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=345262 EXW58_RS05825 WP_215580912.1 1142441..1143124(+) (mecA) [Bacillus mycoides strain BPN03/1]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAACCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTGTCGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAGGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTGGATAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACCAGTAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTGCAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTTGATGAAGTGCTACATGATGAAGAAGAGATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.263

100

0.555


Multiple sequence alignment