Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   C9E88_RS12645 Genome accession   NZ_CP035934
Coordinates   2676693..2681234 (-) Length   1513 a.a.
NCBI ID   WP_106985069.1    Uniprot ID   A0A498CZK0
Organism   Acinetobacter cumulans strain WCHAc060092     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2671693..2686234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9E88_RS12615 (C9E88_007790) elsL 2672749..2673246 (-) 498 WP_171356357.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  C9E88_RS12620 (C9E88_007785) - 2673246..2673647 (-) 402 WP_106985064.1 YbaN family protein -
  C9E88_RS12625 (C9E88_007780) - 2673767..2674624 (+) 858 WP_106985065.1 DUF1853 family protein -
  C9E88_RS12630 (C9E88_007775) - 2674767..2674916 (+) 150 WP_106985066.1 entericidin A/B family lipoprotein -
  C9E88_RS12635 (C9E88_007770) dapE 2675047..2676183 (+) 1137 WP_106985067.1 succinyl-diaminopimelate desuccinylase -
  C9E88_RS12640 (C9E88_007765) - 2676242..2676700 (-) 459 WP_106985068.1 hypothetical protein -
  C9E88_RS12645 (C9E88_007760) chpA 2676693..2681234 (-) 4542 WP_106985069.1 Hpt domain-containing protein Regulator
  C9E88_RS12650 (C9E88_007755) - 2681408..2683480 (-) 2073 WP_106985070.1 methyl-accepting chemotaxis protein -
  C9E88_RS12655 (C9E88_007750) - 2683527..2684063 (-) 537 WP_106985071.1 chemotaxis protein CheW -
  C9E88_RS12660 (C9E88_007745) - 2684070..2684438 (-) 369 WP_106985072.1 response regulator -
  C9E88_RS12665 (C9E88_007740) pilG 2684467..2684850 (-) 384 WP_106985073.1 twitching motility response regulator PilG Regulator
  C9E88_RS12670 (C9E88_007735) - 2685140..2685784 (+) 645 WP_106985074.1 hypothetical protein -

Sequence


Protein


Download         Length: 1513 a.a.        Molecular weight: 168317.28 Da        Isoelectric Point: 4.3261

>NTDB_id=345164 C9E88_RS12645 WP_106985069.1 2676693..2681234(-) (chpA) [Acinetobacter cumulans strain WCHAc060092]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFGELDNLLSDWLDKPQDKDLLTTIRRHFHTLKGSGRMVGAKTA
GEAAWTVEDTLNRVIGGSLTLSPTIQQYAQTVLNVYQYKLYPSFKNVTELTVDLRPIVLLGQQLQQGLSPEPALQELLGL
ATRLKSSSDVTGLELDTVEAVETTEFVTPDLAAIELPAEDNLIAETVAIFIEEAEEHLQTIENFLKQEDTKHQDYNALIR
ALHTLRGSSSMAQIDQIFEASSKVENLFKTQLQEEIGSTSKETALLIQYSEFVRDFLHTLRKGETSQLNAIYNTFNDAWN
DYGFASESMESDIQPQGLVSKLIELNIDLLLDAEFEFDTRAKAEFPEYLETLSTQADELLAHTDNRASVGIHQFTTELKS
GYDNLRQKPQLLNLDYAYELFAQAHQEFIHLFDTLAAGQRVVLSDEAQKLLSDLTAFVQQDIEDTAESSNVLSTLSAKVE
IAPSSASTAVESSSLHVPAPAETSTAGIDFATLSQKLAKDQAKHQSTDSNTDFDPDLLEIFLEEADELLSGIDSDLNTWN
KDLTNTGSLNNLMRYLHTLKGGANMISATNIGLIAHELESIYERVIRGQMQATVPLVQVIRLVQDDLSDRIQTIRDVGVD
YAATEAVDILTHIQSIVEGQVESSATVASTPEVVDIEVHPAPVEDSPVIEFEVPTVSIEAIEFETPAVIEPVAQVIEPSS
SVASASTSVDDELLSVVEETFLEEAEEILEQAAELLIQWFDQRSDRSILLQLQRAAHSIKGGARMVENEPVAAVAYQLET
TFEQFAVHHFNSNAYDDLLQTTLSWLKQGIFEKDYSNFDSIKRSLESIEYVDVTAQLPSRRSVDGQGSATRNFEFIQGDG
VEPPSMQGEWTDTLATDNSNEMIRISADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMDGELE
SQILAKHGTENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLSEKIRDTEGLLLQQSRIQAEIQESLMRTRLV
PFSRMLPRLQRIVRQTSTTLNRPAELVVQNTEGELDRTILERLVTPFEHMLRNAIDHGLEETTDRIALNKPEVGHIVLNI
SRQGTDVLVSFSDDGKGIDESKIKEKALSQGLIKADQVLDKQEILQLIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALG
GHVSVESELGKGTTFTIRVPTTVAVSDALMVKVGDQQFAISLAQIDRIVRIGPSALESYFNSKADTFKIDNENYKLRYLS
EFVSNQPVPRLSSVSHSLPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPIGQQFSNIGAIAGATILGDGQVCLILDGQNI
ARQIQTTQRLKHVSDSRDLSRHGNARRLVMIVDDSVTVRKVTSRLLERQGYDIITAKDGVDAIEQLENVRPDLMLLDIEM
PRMDGFEVTNLVRHHDIHKELPIIMITSRTGEKHRERAFSLGVSHYMGKPFQEAELLANIEALIAEKQELIYD

Nucleotide


Download         Length: 4542 bp        

>NTDB_id=345164 C9E88_RS12645 WP_106985069.1 2676693..2681234(-) (chpA) [Acinetobacter cumulans strain WCHAc060092]
ATGAAAGAAATATTAAAAAATTTAGTCGAAACGACAACGCTTCCTGAGGATAGCTATCTCGATCAAGATGCAGAAATTTT
AGAAATTTTTGTTGAAGAGATCGAGGAGATTTTTGGCGAGCTTGATAATTTATTATCTGATTGGCTGGACAAACCGCAAG
ATAAAGACTTGCTCACGACAATTCGTCGCCATTTCCATACCTTAAAGGGTTCTGGTCGTATGGTGGGCGCAAAGACGGCG
GGTGAGGCGGCATGGACAGTTGAAGATACTTTGAACCGCGTTATTGGTGGTTCGCTTACGCTTAGCCCAACGATTCAACA
GTATGCTCAAACGGTTTTAAATGTTTATCAATATAAGCTGTATCCAAGCTTTAAAAATGTCACCGAGCTGACGGTTGATT
TGCGTCCGATTGTCCTTTTAGGACAACAATTACAACAAGGTCTAAGCCCAGAGCCAGCATTACAAGAGCTCTTAGGTTTG
GCAACTCGCTTAAAGTCCTCTTCGGATGTCACAGGTCTAGAGCTTGATACAGTTGAGGCAGTTGAAACAACAGAATTTGT
AACACCTGATTTGGCAGCGATTGAACTTCCTGCTGAAGATAATTTAATTGCAGAAACAGTTGCGATCTTCATTGAAGAAG
CAGAAGAGCATCTGCAGACAATTGAAAACTTCTTGAAACAAGAAGATACCAAACATCAAGATTATAATGCCTTAATCCGT
GCGCTACACACTTTGCGTGGTAGTTCATCAATGGCACAAATCGATCAAATTTTTGAAGCAAGCTCTAAAGTTGAAAATTT
ATTCAAAACACAGCTTCAAGAAGAAATCGGTTCGACTTCAAAAGAAACTGCATTGCTGATTCAGTACTCTGAGTTTGTAC
GCGACTTTTTACATACCTTACGTAAGGGTGAAACAAGCCAGTTAAATGCAATTTACAATACCTTCAATGATGCATGGAAT
GATTATGGTTTTGCATCTGAAAGTATGGAGTCAGATATTCAACCACAAGGTTTAGTATCGAAACTCATTGAATTAAATAT
TGATTTGTTATTGGATGCTGAGTTTGAGTTTGATACGCGAGCTAAAGCTGAATTCCCAGAATACTTAGAAACACTGAGCA
CGCAAGCAGATGAACTACTTGCACATACTGATAATCGTGCCTCTGTGGGAATTCATCAGTTTACCACTGAGCTAAAATCA
GGCTATGACAATCTACGTCAAAAACCGCAGCTGTTAAATCTGGATTATGCTTATGAGTTATTTGCTCAAGCACATCAAGA
ATTTATTCATTTATTTGATACCTTGGCTGCAGGTCAGCGTGTAGTATTATCAGATGAAGCACAAAAGTTGCTGAGTGATT
TAACTGCATTTGTACAACAAGATATTGAAGATACAGCTGAAAGTAGCAATGTATTGTCTACATTAAGTGCGAAAGTTGAA
ATTGCACCAAGTAGTGCCTCAACAGCTGTAGAGTCAAGCAGTCTCCATGTTCCTGCGCCTGCTGAAACCAGCACTGCAGG
TATCGATTTTGCGACCTTAAGTCAAAAATTAGCTAAAGATCAAGCCAAGCATCAATCTACAGACTCAAATACTGACTTTG
ATCCAGATTTGCTTGAAATCTTCCTTGAAGAAGCTGATGAGTTATTGTCGGGTATTGATAGCGACTTAAATACTTGGAAT
AAAGATCTAACAAATACAGGATCTTTAAATAATTTAATGCGCTATTTGCATACGCTGAAAGGCGGTGCAAACATGATTTC
AGCGACCAATATTGGCTTAATTGCACATGAACTAGAGTCTATCTACGAACGTGTAATTCGTGGTCAGATGCAAGCTACTG
TGCCATTGGTACAAGTCATTCGTTTGGTGCAAGATGATCTTTCAGATCGTATTCAAACGATTCGTGATGTGGGCGTAGAC
TACGCTGCGACTGAAGCTGTTGATATCCTTACCCATATCCAAAGCATTGTTGAAGGTCAGGTCGAATCAAGTGCGACTGT
GGCAAGTACTCCTGAAGTTGTGGACATTGAGGTGCACCCTGCACCAGTCGAAGACAGTCCAGTCATTGAATTTGAAGTAC
CAACTGTTTCAATTGAAGCGATTGAATTTGAAACACCTGCTGTGATTGAACCAGTTGCTCAAGTCATCGAGCCAAGTTCT
TCAGTAGCAAGTGCTTCTACATCGGTGGACGATGAACTTCTTTCAGTGGTGGAAGAAACCTTTCTGGAAGAAGCTGAAGA
GATTCTGGAACAAGCTGCTGAGTTATTAATTCAATGGTTTGATCAGCGTAGTGACCGTAGTATTTTGCTTCAATTACAAC
GTGCAGCCCACAGTATTAAAGGTGGCGCGCGCATGGTTGAAAATGAGCCAGTCGCGGCTGTTGCTTATCAGTTGGAAACA
ACGTTTGAGCAATTCGCGGTTCATCATTTTAACTCAAACGCTTACGACGACTTACTACAAACAACACTCAGCTGGTTGAA
GCAAGGAATCTTCGAAAAAGATTACAGCAACTTCGATAGTATTAAACGTAGCTTAGAGTCGATTGAATACGTTGATGTAA
CGGCACAGTTGCCAAGCCGCCGCAGTGTGGATGGTCAAGGTTCAGCAACACGTAACTTTGAATTTATTCAGGGTGATGGT
GTAGAGCCACCTTCTATGCAAGGTGAATGGACAGATACATTAGCCACTGATAATAGCAATGAAATGATTCGTATCTCAGC
TGATTTGGTTGAGAAGATGATTGACTTGTCAGGCGAAAACTCAATTAACCGTTCGCGTATTGAGATGGATTTGGGGCAAT
TGGGTAATACGCTCAATGAGATGGAATTGGCAATTAAGCGTTTAGCTGACCAGCTACGTCGAATGGACGGTGAGCTTGAA
TCACAAATTCTTGCTAAGCATGGTACAGAAAATTCGCGCTATGCGGATTTTGACCCATTGGAAATGGACCAATATTCGTC
CTTAAACCAATTGTCAAAATCATTGGCCGAGTCTGCATCGGATTTGGTCGACTTTAAGAGTACGTTGTCCGAAAAAATCC
GTGATACAGAAGGTTTGTTATTACAACAGTCACGTATTCAGGCAGAAATTCAAGAAAGTTTAATGCGTACTCGCTTGGTT
CCGTTCTCACGGATGTTACCTCGTTTACAACGTATTGTGCGTCAAACCTCAACCACCTTAAACCGCCCAGCGGAGTTGGT
GGTGCAAAACACCGAAGGTGAATTAGACCGTACGATCTTAGAGCGTCTGGTTACGCCTTTCGAGCACATGCTTCGAAACG
CGATTGACCATGGTCTAGAGGAAACGACAGATCGTATTGCGTTGAATAAGCCTGAGGTGGGTCATATTGTTCTGAACATT
AGTCGCCAAGGTACAGACGTTCTTGTGTCATTTAGCGATGATGGTAAAGGGATTGATGAGAGCAAAATTAAAGAAAAAGC
GCTCAGCCAAGGTTTAATTAAGGCCGATCAAGTACTCGACAAGCAAGAAATTTTGCAGTTAATTTTCCATCCTGGTTTTA
GTACCGCGAAGGAAGTAACCCAAATTTCTGGTCGTGGTGTAGGTCTGGACGTAGTACAAAGTGAAATCAAAGCTTTGGGT
GGTCATGTGAGTGTTGAGTCTGAATTGGGCAAAGGCACGACCTTTACGATTCGTGTACCAACCACAGTGGCTGTAAGTGA
TGCCTTGATGGTGAAAGTGGGTGATCAACAATTTGCGATTTCGTTGGCACAAATTGACCGTATTGTACGTATTGGGCCAT
CTGCTTTAGAAAGCTATTTCAATAGCAAGGCAGATACATTCAAAATTGATAATGAAAATTACAAGTTACGTTATCTATCT
GAATTTGTGTCAAACCAGCCAGTACCACGTTTAAGCAGTGTTTCTCATTCATTGCCTGTACTTTTAATTAAAGGAAACAG
TGGTCAAACGATTGCATTATTGGTTGATCAATTAATTGGTTCGCGTGCTCAAATTGTGGTGAAACCAATTGGTCAGCAGT
TCTCTAATATTGGAGCAATTGCAGGTGCAACGATCTTAGGTGATGGTCAGGTGTGTTTGATTTTAGATGGTCAAAATATT
GCCCGTCAGATTCAAACGACGCAGCGTCTTAAACATGTGTCTGATTCGCGTGATCTGAGCCGTCATGGTAATGCACGTCG
TCTTGTGATGATTGTCGATGACTCCGTAACGGTACGTAAAGTAACGTCGCGTCTGCTTGAGCGTCAAGGCTATGACATCA
TTACTGCTAAAGATGGTGTGGATGCGATTGAACAGCTTGAAAATGTAAGACCAGACTTGATGTTACTGGATATCGAAATG
CCACGTATGGATGGTTTCGAAGTAACCAACTTGGTTCGACATCACGACATCCACAAAGAATTGCCAATTATTATGATCAC
ATCGCGTACGGGTGAAAAACACCGTGAGCGTGCGTTCAGTTTGGGCGTCAGCCACTATATGGGTAAACCATTCCAAGAAG
CGGAATTGCTTGCTAACATTGAAGCGTTGATTGCCGAAAAACAGGAGTTGATCTATGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.589

100

0.62


Multiple sequence alignment