Detailed information NTG0345058

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: GD578_RS02385
• Genome accession: NZ_CP045560
• Coordinates: 504405..505718 (+)
• Length: 437 a.a.
• NCBI ID: WP_002053318.1
• Uniprot ID: A0A1V2UY05
• Organism: Acinetobacter nosocomialis strain AC1530
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 499405..510718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GD578_RS02370 (GD578_02390)	-	499522..501753 (-)	2232	WP_002053320.1	TonB-dependent siderophore receptor	-
GD578_RS02375 (GD578_02395)	tig	502169..503503 (+)	1335	WP_002053278.1	trigger factor	-
GD578_RS02380 (GD578_02400)	clpP	503698..504303 (+)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
GD578_RS02385 (GD578_02405)	clpX	504405..505718 (+)	1314	WP_002053318.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
GD578_RS02390 (GD578_02410)	-	505866..506582 (+)	717	WP_002053277.1	DUF2846 domain-containing protein	-
GD578_RS02395 (GD578_02415)	-	506607..507161 (-)	555	WP_002053362.1	DUF2059 domain-containing protein	-
GD578_RS02400 (GD578_02420)	-	507303..508829 (-)	1527	WP_002053445.1	fumarate hydratase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48094.93 Da
• Isoelectric Point: 5.0785

>NTDB_id=345058 GD578_RS02385 WP_002053318.1 504405..505718(+) (clpX) [Acinetobacter nosocomialis strain AC1530]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKKDESKKIAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKPERQPKETATHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=345058 GD578_RS02385 WP_002053318.1 504405..505718(+) (clpX) [Acinetobacter nosocomialis strain AC1530]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCGAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTGATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTGAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGACCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTAGCTCGTT
TGTTAGATGTTCCATTTGCGATGGCAGATGCGACCACTTTAACTGAAGCGGGTTATGTCGGCGAAGACGTTGAAAATATT
GTACAAAAGCTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGCATTATCTATATCGATGAAATCGACAA
GATTACACGTAAATCTGAAAATCCTTCGATTACGCGTGACGTTTCTGGTGAAGGTGTACAACAAGCATTGCTTAAGATGA
TTGAAGGTACTGTAGCTTCAATTCCACCACAAGGTGGACGTAAACATCCTCAGCAAGAGTTCATTCAAATTGATACCTCA
AATATTTTATTTATTTGTGGTGGTGCATTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACAGCTGACGTGAAGAAAAAAGATGAAAGCAAGAAAATTGCTGAATTGTTCCGTCAAGTTGAGCCAACTGACTTAG
TAAAATTTGGTTTAATTCCAGAGTTTATTGGCCGTTTACCAGTCATTGCGACGCTAGAAGAGCTTGATGAAGAAGCATTA
ATGCAAATTTTGACAGAACCGAAAAATGCATTAACTCGTCAATACCAATACTTGTTCAATATGGAAAATGTTGACCTTGT
ATTTGAAGACTCTGCTTTACGTGCAGTTGCTAAGCGAGCGCTTGAGCGTAATACCGGAGCTCGTGGTCTACGTTCGATTC
TGGAAAACGTTTTACTTGAAACAATGTATGACTTACCAAGTCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTG
ATTAATGGTGAAGCTGAACCTGTTTATAAGCCAGAACGCCAGCCTAAAGAAACAGCAACTCATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

3D structure

• AlphaFold DB: A0A1V2UY05

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	60.15	91.304	0.549
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.683	92.449	0.524