Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   GD578_RS01150 Genome accession   NZ_CP045560
Coordinates   244332..244967 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter nosocomialis strain AC1530     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 239332..249967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GD578_RS01135 (GD578_01140) - 240120..241304 (+) 1185 WP_002048911.1 S41 family peptidase -
  GD578_RS01140 (GD578_01145) - 241308..242729 (-) 1422 WP_002048902.1 sigma-54 dependent transcriptional regulator -
  GD578_RS01145 (GD578_01150) pilS 242753..244321 (-) 1569 WP_025467730.1 PAS domain-containing sensor histidine kinase Regulator
  GD578_RS01150 (GD578_01155) letA 244332..244967 (-) 636 WP_000633799.1 response regulator Regulator
  GD578_RS01155 (GD578_01160) pbpG 245179..246225 (+) 1047 WP_031951071.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  GD578_RS01160 (GD578_01165) thrC 246333..247472 (-) 1140 WP_002048893.1 threonine synthase -
  GD578_RS01165 (GD578_01170) - 247528..248829 (-) 1302 WP_002048970.1 homoserine dehydrogenase -
  GD578_RS01170 (GD578_01175) - 249074..249889 (-) 816 WP_004710941.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=345052 GD578_RS01150 WP_000633799.1 244332..244967(-) (letA) [Acinetobacter nosocomialis strain AC1530]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=345052 GD578_RS01150 WP_000633799.1 244332..244967(-) (letA) [Acinetobacter nosocomialis strain AC1530]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCAGATGT
TGAGGTAATTGGACAAGCCGAATCTGGGGAAGAAGCAATTGCTATCGTTCGCCAGCAACATCCGCAAGTCGTACTACTTG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACTCGTCGTTTATTACAAACAGCCCCAGAGACCAAAGTCATTGCT
GTAAGTGGCCTTGCTGAAGAACCCTACCCATCTTTATTGCTAAAAGCTGGTGCAAAAGGCTATATCACCAAGGGTGCGCC
AATTGCCGAGATGGTACGTGCAATTAATAAAGTCATGCAGGGCGGTAAATATTTTAGTGCCGATATTGCCGAGCAACTAG
CAAGCTCTTATTTATCCGACACTCAACAATCCCCTTTTGATTCTCTATCAGAGCGGGAAATGCAAGTTGCGATGATGGTC
GTCAATTGTATTAGCGCACAAGAAATTGCCGATAAACTTTTTGTGAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTCACACACCTTGCGATTCGTTACGGTCTGATCAAACCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55