Detailed information NTG0344977

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: EWA64_RS05560
• Genome accession: NZ_CP035921
• Coordinates: 1005588..1008977 (+)
• Length: 1129 a.a.
• NCBI ID: WP_061895227.1
• Uniprot ID: -
• Organism: Vibrio cidicii strain 2423-01
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1000588..1013977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EWA64_RS05540	erpA	1001002..1001343 (-)	342	WP_039430398.1	iron-sulfur cluster insertion protein ErpA	-
EWA64_RS05545	hemL	1001625..1002920 (+)	1296	WP_061895229.1	glutamate-1-semialdehyde 2,1-aminomutase	-
EWA64_RS05550	-	1003163..1004248 (+)	1086	WP_061895244.1	AI-2E family transporter	-
EWA64_RS05555	rsmC	1004320..1005342 (+)	1023	WP_061895228.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
EWA64_RS05560	chiS	1005588..1008977 (+)	3390	WP_061895227.1	response regulator	Regulator
EWA64_RS05565	-	1009749..1011422 (+)	1674	WP_061895226.1	ABC transporter substrate-binding protein	-
EWA64_RS05570	-	1011589..1012575 (+)	987	WP_061895225.1	ABC transporter permease	-
EWA64_RS05575	-	1012578..1013603 (+)	1026	WP_039435873.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127365.67 Da
• Isoelectric Point: 6.2995

>NTDB_id=344977 EWA64_RS05560 WP_061895227.1 1005588..1008977(+) (chiS) [Vibrio cidicii strain 2423-01]
MFKFYRKQKFKRLQSTLMTAFLVLSLTPLTIIAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQVMDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGLDIEQARENAQQRYIQGSGDQIKTSILPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLIDLDGNVTYSIYKYDNFGTNLKTGPYKDTLLGKSFRQLAKDVTEKRKDNEDYTPVLISDFAEEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGLTKLVADVNKDAVIHTLLVGSDHLPRTMSTKQDDISRSADVINKALAGLTSVGTYINGLGEA
TIAAYTPISMKDQTWALVVQLPESEAFARIQQLEKLFVIAMLIAIILVFICSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTDRKDEIGRLAVSFERMQRSIRDKIQLIKTQNRELEKSLLLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLVSGANGPIPSNQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSLDIHKSAVSLASATRLVLELSSHLLGNKTLRI
INQVPNDLAPVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDKVRIQVVDTGQGIPAEQLEHIFEPLIQAGQDAG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASDDEINTTAKMAQYHHFQAPDSNELLSLDQSSLPENP
QGALLVVADDEPVNLRVLESFLRIEGYRVRTASDGPETLALIKQEKPALLLLDIMMPGMSGYQVCHQLRQEFDLAELPVI
MLTALNQSEDRVRGFEAGANDYLSKPFNKQELAARIKAHLMASKAEERRLENSRLEAELKQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANEAACKLFKRNLEQIRRSNAEELIAPKYLTVKQPHYCGHIDIYVEDVRQHIETDILKLPEG
SGLDAMYIFNVGGGATASRIHNLETAVEVLSSYAFDGDKEKLQSLKELGGEFTRLADKALGSSQNKQEIMREILVDVMTH
ALDYWESVTGENKFAFAEKSGLWRVYLDRSTLQTRTLDKYMRIETLPRTPRWRTVLSSIEFILAHCKEQSPERSHIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=344977 EWA64_RS05560 WP_061895227.1 1005588..1008977(+) (chiS) [Vibrio cidicii strain 2423-01]
ATGTTTAAGTTTTACCGGAAACAGAAATTCAAACGTCTGCAAAGTACCCTAATGACGGCCTTTTTGGTGTTGAGTCTGAC
ACCATTAACCATCATTGCGATTTTCTTTTTGCAATCTCATAGCAAGGATCTGCAAGAGCAAAGCACTTCCCACCTCCTCT
CAGTGCGCGATACTAAGCAACAGCAGGTAATGGATTATTTTCAGGCACAAGAAACTGAAGTGATGGGTTTTGTCCGTTCA
GAGTTGGCTTATGCCAGTGGTGGGCGTTTTTATGGCCTAGTCAATGCCTTTAAAAGTCTAGGTCTGGATATCGAGCAAGC
GCGAGAAAACGCCCAGCAACGCTATATTCAGGGCTCGGGCGATCAGATCAAAACGTCAATCTTGCCTGAATCCAGCAGCT
ATGTCGGGAGTGAACGTTACCGACTGCTGCACAAGCGCTATCACTGGGCCTACTTAGAGCTGCTCAAACGCTCCGATTTT
GACGACATCCTGCTCATCGATTTGGACGGCAACGTCACCTACTCCATCTATAAATACGATAATTTTGGTACCAACCTGAA
AACGGGGCCCTACAAAGACACTTTACTTGGAAAGAGCTTTCGCCAGCTTGCCAAAGACGTTACGGAAAAGCGCAAGGACA
ACGAAGATTACACCCCAGTGCTCATTTCCGATTTTGCCGAGGAAGACGGCAAGCAGGTCGCTTGGTTAGGTGCACCCATC
ATTCAACAAGGCTACTTGCACAGTTATGCGATGTTCCGTTTACCGAACAATGGCTTAACTAAACTGGTTGCCGATGTAAA
TAAAGATGCAGTGATCCATACTTTGCTCGTAGGCAGTGACCATTTACCTCGTACCATGAGCACCAAACAGGACGATATTA
GCCGAAGTGCGGACGTGATCAACAAAGCGCTGGCAGGATTGACCTCAGTTGGAACCTACATAAATGGCTTGGGTGAAGCA
ACCATTGCCGCATATACACCGATTTCGATGAAAGATCAAACTTGGGCGCTCGTAGTTCAATTGCCTGAAAGCGAAGCCTT
TGCGCGCATCCAGCAATTGGAGAAACTGTTTGTCATCGCCATGCTGATTGCCATCATTTTGGTGTTTATCTGCTCACATT
ATTTGTCCAATTTCATTACCTCTCCACTGCTTAAACTAACGTGGGCAGCCGAGCGAGTCTCCGCTGGCGATCTTGACGAA
AACATGATCAATACGGATCGCAAGGATGAAATAGGCCGCTTGGCGGTCAGTTTTGAACGTATGCAGCGCTCTATTCGCGA
CAAAATTCAGTTAATCAAAACACAAAACCGAGAGTTGGAAAAAAGTCTGCTGTTGATACAAAAACAAAATGATGAACTGC
AATTAGCCGACAAACTCAAAGATGAGTTCCTCGCGACCACCTCACACGAGTTGCGCACGCCATTGCATGGCATGATTGGC
ATTGCCGAAACCTTAGTCTCCGGTGCCAATGGTCCGATTCCTAGCAACCAAAAATATCAGCTCGATATCATCATTAAAAG
TGGCCAAAGGCTTGCAAACCTCGTTGACGACCTACTTGATTATCACAAAATGCGCTACGGCAGCTTGGACATTCATAAGT
CGGCGGTCAGTTTGGCCAGTGCCACCCGCTTAGTGCTTGAGCTTTCTAGCCATCTGCTTGGTAATAAAACATTAAGGATT
ATCAACCAAGTTCCGAACGATCTCGCCCCTGTTTCCGCCGATCCACAGCGCTTAGAGCAGGTGTTGTACAACTTGATTGG
CAATGCGATTAAGTACACCAGTGAAGGTAAAATCGTCATCTCCGCCAACGTGGTCGACGACAAAGTAAGAATCCAAGTCG
TGGACACAGGACAAGGCATTCCGGCAGAACAGTTGGAGCACATTTTTGAACCATTGATTCAAGCGGGTCAGGATGCTGGC
CGTTATCGGCAAGGGGCTGGCCTTGGCCTCTCAATTAGCCGTCAGTTAATTGAACTCATGGGCGGCTCTCTGTATGTCAG
CAGCCAGCCAATGGTGGGCACAACCTTTAGCTTTACCCTGCCTTTGGCCAGTGATGACGAGATCAATACCACAGCGAAAA
TGGCGCAATACCATCACTTTCAAGCACCTGACAGCAATGAATTACTTTCTCTTGATCAATCATCCCTTCCAGAAAATCCG
CAGGGTGCATTGTTAGTGGTCGCTGACGATGAGCCTGTGAATCTACGTGTACTGGAAAGTTTCCTGCGTATTGAAGGCTA
TCGTGTCAGAACTGCTTCCGATGGCCCGGAAACACTCGCGCTGATCAAGCAAGAGAAGCCCGCGCTATTGCTACTCGATA
TCATGATGCCGGGCATGAGCGGTTATCAGGTTTGCCACCAACTGCGTCAAGAGTTCGATCTGGCTGAACTGCCCGTTATC
ATGCTGACCGCACTCAATCAAAGCGAAGATCGTGTGCGCGGCTTTGAGGCAGGTGCCAACGACTACTTGTCAAAACCGTT
CAATAAACAAGAGCTTGCTGCGCGAATCAAAGCGCATCTGATGGCGAGTAAAGCCGAGGAGCGACGCTTAGAAAACAGCC
GCTTAGAAGCCGAGTTAAAACAGAGAGCGATGGTCGAGGCGAGTTTACTTGAGACGCAAGGACGGCTACTGGAGCAGCTG
GAATCCGCTCCTGAAGCCATCATCTGTATCCGTGAAGACAAACGCATTCGTTTTGCCAACGAAGCGGCTTGCAAGCTGTT
TAAACGCAATTTGGAACAGATCAGACGTTCAAACGCAGAAGAGCTAATCGCACCCAAGTACCTAACCGTCAAACAACCCC
ACTATTGCGGCCACATTGATATTTACGTCGAAGACGTAAGACAACACATTGAAACCGACATCCTCAAGTTGCCTGAAGGA
TCAGGTTTAGATGCGATGTATATCTTCAACGTCGGTGGCGGCGCAACCGCGTCTCGCATTCACAACTTAGAAACCGCCGT
TGAGGTGCTCTCAAGCTATGCCTTTGATGGCGATAAGGAAAAACTTCAGAGCTTGAAAGAGCTCGGTGGCGAGTTTACTC
GGTTGGCTGACAAAGCCTTGGGGAGCAGCCAAAACAAACAAGAGATAATGCGTGAGATCTTGGTTGATGTAATGACTCAT
GCACTCGACTACTGGGAATCGGTTACAGGTGAGAATAAGTTTGCTTTTGCTGAGAAAAGCGGTTTGTGGCGTGTCTATCT
CGACCGAAGTACGCTGCAAACCCGCACCCTCGACAAATACATGCGCATTGAGACGCTACCAAGAACGCCTCGCTGGCGCA
CTGTACTCAGTTCGATTGAGTTTATTCTCGCACATTGTAAAGAGCAAAGCCCAGAGCGTAGCCATATAGAGATGCAGCGC
GATAAGCTGCAACGTCTACTCACCAGCTAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (726-837)

• PAS fold (PAS) (877-926)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.351	100	0.764