Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   GEV49_RS17065 Genome accession   NZ_CP045547
Coordinates   3858150..3859274 (+) Length   374 a.a.
NCBI ID   WP_153178584.1    Uniprot ID   -
Organism   Streptomyces sp. SYP-A7193     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3853150..3864274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GEV49_RS17050 (GEV49_17150) - 3853760..3854572 (+) 813 WP_007453317.1 hypothetical protein -
  GEV49_RS17055 (GEV49_17155) - 3854597..3856393 (-) 1797 WP_153178583.1 BACON domain-containing protein -
  GEV49_RS17060 (GEV49_17160) radA/sms 3856659..3858068 (+) 1410 WP_054100914.1 DNA repair protein RadA Machinery gene
  GEV49_RS17065 (GEV49_17165) disA 3858150..3859274 (+) 1125 WP_153178584.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  GEV49_RS39785 - 3859293..3860150 (-) 858 WP_165685209.1 hypothetical protein -
  GEV49_RS17080 (GEV49_17180) - 3860325..3860978 (+) 654 WP_194279973.1 phosphatase PAP2 family protein -
  GEV49_RS17085 (GEV49_17185) - 3860997..3861668 (-) 672 WP_153178588.1 response regulator transcription factor -
  GEV49_RS17090 (GEV49_17190) - 3861665..3863494 (-) 1830 WP_228126145.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40117.96 Da        Isoelectric Point: 4.9989

>NTDB_id=344895 GEV49_RS17065 WP_153178584.1 3858150..3859274(+) (disA) [Streptomyces sp. SYP-A7193]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTSLRDGLERVLRGNTGGLMVLGSDKTVEQMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVSQRLEMVRTIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALVELDKLSHAELLELPMVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGSLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=344895 GEV49_RS17065 WP_153178584.1 3858150..3859274(+) (disA) [Streptomyces sp. SYP-A7193]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCGCCCGGCACGTCCTTGCGCGACGGCCTGGAGCGGGTCCTGCGCGGGAACACCGGCGGTCTGATGGTGC
TGGGTTCCGACAAGACCGTCGAGCAGATGTGCACGGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCCTCGGACCTGTCGAAGATCCTGCGGGCGGGGGTGCAGCTCCTTCC
GGACCCGACCATCCCCACGGAGGAGACCGGCACCCGGCACCGTACGGCGGACCGGGTCAGCAAGCAGGTCGGGTTCCCCG
TGGTCTCGGTCTCGCAGTCCATGCGGCTGATCGCGCTGTACGTGGACGGGCAGCGTCGGGTCCTCGAGGACTCCGCCGCC
ATCCTGTCCCGGGCCAACCAGGCCCTGGCCACCCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGCACGCTCTC
GGCTCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTCTCGCAGCGCCTGGAGATGGTCCGCACGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGGACGGACGGACGCCTCCTTGCCCTGCAGTTGGACGAGCTGATCGCC
GGTGTGGAGCCCGAGCGTGAGCTGGTCGTGCGGGACTACGTGCCCGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCGGA
GGCGCTGGTCGAGCTGGACAAGCTCAGCCACGCCGAGCTGCTGGAACTGCCGATGGTGGCCCGGGCGTTGGGTTACACCG
GCTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGTTTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCAGTCTCCAGAAGCTGCTCGCCGCCAGCGTCGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCGCGGGCACGCAGCGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTCGAGCGTTACG
TCTGA

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

Helix-hairpin-helix motif (HHH_2)

(324-359)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438

Multiple sequence alignment