Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   FPL20_RS15800 Genome accession   NZ_CP045478
Coordinates   2936479..2937096 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain JD-014     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2931479..2942096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL20_RS15765 (FPL20_GE02986) ynzD 2931721..2931894 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  FPL20_RS15770 (FPL20_GE02987) yneF 2931968..2932186 (-) 219 WP_003221221.1 YneF family protein -
  FPL20_RS15775 (FPL20_GE02988) sirA 2932272..2932718 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  FPL20_RS15780 (FPL20_GE02989) recP/tkt 2932871..2934874 (-) 2004 WP_003245397.1 transketolase Machinery gene
  FPL20_RS15785 (FPL20_GE02990) ynzC 2935043..2935276 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  FPL20_RS15790 (FPL20_GE02991) dinL 2935340..2935993 (-) 654 WP_003231596.1 recombinase family protein -
  FPL20_RS15795 (FPL20_GE02992) yneA 2936012..2936329 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  FPL20_RS15800 (FPL20_GE02993) dinR/lexA 2936479..2937096 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  FPL20_RS15805 - 2937433..2937729 (-) 297 WP_223257629.1 hypothetical protein -
  FPL20_RS15810 (FPL20_GE02995) fosM 2937638..2938072 (-) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  FPL20_RS15815 (FPL20_GE02996) - 2938280..2938729 (+) 450 WP_003245454.1 YndM family protein -
  FPL20_RS15820 (FPL20_GE02997) pghL 2938756..2939514 (-) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  FPL20_RS15825 (FPL20_GE02998) - 2939740..2940054 (-) 315 WP_003245621.1 hypothetical protein -
  FPL20_RS15830 (FPL20_GE02999) yndJ 2940142..2941782 (-) 1641 WP_003231612.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=344732 FPL20_RS15800 WP_003238209.1 2936479..2937096(+) (dinR/lexA) [Bacillus subtilis strain JD-014]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=344732 FPL20_RS15800 WP_003238209.1 2936479..2937096(+) (dinR/lexA) [Bacillus subtilis strain JD-014]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1