Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   FPL20_RS15780 Genome accession   NZ_CP045478
Coordinates   2932871..2934874 (-) Length   667 a.a.
NCBI ID   WP_003245397.1    Uniprot ID   P45694
Organism   Bacillus subtilis strain JD-014     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2927871..2939874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL20_RS15730 (FPL20_GE02979) sspO 2928283..2928429 (+) 147 WP_003244839.1 acid-soluble spore protein SspO -
  FPL20_RS15735 (FPL20_GE02980) sspP 2928461..2928607 (+) 147 WP_003221237.1 small acid-soluble spore protein P -
  FPL20_RS15740 (FPL20_GE02981) cotM 2928688..2929080 (+) 393 WP_010886520.1 outer spore coat protein CotM -
  FPL20_RS15745 (FPL20_GE02982) yneK 2929314..2929742 (+) 429 WP_003231580.1 DynA interaction protein YneK -
  FPL20_RS15750 (FPL20_GE02983) yneJ 2929773..2930264 (-) 492 WP_010886519.1 CcdC family protein -
  FPL20_RS15755 (FPL20_GE02984) yneI 2930343..2930705 (-) 363 WP_003245707.1 response regulator -
  FPL20_RS15760 (FPL20_GE02985) ccdA 2930794..2931501 (-) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  FPL20_RS15765 (FPL20_GE02986) ynzD 2931721..2931894 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  FPL20_RS15770 (FPL20_GE02987) yneF 2931968..2932186 (-) 219 WP_003221221.1 YneF family protein -
  FPL20_RS15775 (FPL20_GE02988) sirA 2932272..2932718 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  FPL20_RS15780 (FPL20_GE02989) recP/tkt 2932871..2934874 (-) 2004 WP_003245397.1 transketolase Machinery gene
  FPL20_RS15785 (FPL20_GE02990) ynzC 2935043..2935276 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  FPL20_RS15790 (FPL20_GE02991) dinL 2935340..2935993 (-) 654 WP_003231596.1 recombinase family protein -
  FPL20_RS15795 (FPL20_GE02992) yneA 2936012..2936329 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  FPL20_RS15800 (FPL20_GE02993) dinR/lexA 2936479..2937096 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  FPL20_RS15805 - 2937433..2937729 (-) 297 WP_223257629.1 hypothetical protein -
  FPL20_RS15810 (FPL20_GE02995) fosM 2937638..2938072 (-) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  FPL20_RS15815 (FPL20_GE02996) - 2938280..2938729 (+) 450 WP_003245454.1 YndM family protein -
  FPL20_RS15820 (FPL20_GE02997) pghL 2938756..2939514 (-) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72344.44 Da        Isoelectric Point: 4.7291

>NTDB_id=344731 FPL20_RS15780 WP_003245397.1 2932871..2934874(-) (recP/tkt) [Bacillus subtilis strain JD-014]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAVAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=344731 FPL20_RS15780 WP_003245397.1 2932871..2934874(-) (recP/tkt) [Bacillus subtilis strain JD-014]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAAGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGTAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGTTTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCGGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P45694

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562